RNA–Protein interactions for RNA: ENST00000539827.5

HOMER3-204, Transcript of homer scaffold protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene HOMER3, Length 1,979 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOMER3-204ENST00000539827 ELK1P19419 428 aa19.9■□□□□ 0.78
HOMER3-204ENST00000539827 EVX1P49640 407 aa19.9■□□□□ 0.78
HOMER3-204ENST00000539827 BAK1Q16611 211 aa19.9■□□□□ 0.78
HOMER3-204ENST00000539827 XKRXQ6PP77 449 aa19.9■□□□□ 0.78
HOMER3-204ENST00000539827 HIST2H2ABQ8IUE6 130 aaPredicted RBP19.9■□□□□ 0.78
HOMER3-204ENST00000539827 TMEM123Q8N131 208 aa19.9■□□□□ 0.78
HOMER3-204ENST00000539827 ZNF433Q8N7K0 673 aaPredicted RBP19.9■□□□□ 0.78
HOMER3-204ENST00000539827 TRMT10AQ8TBZ6 339 aaKnown RBP19.9■□□□□ 0.78
HOMER3-204ENST00000539827 RNF133Q8WVZ7 376 aa19.9■□□□□ 0.78
HOMER3-204ENST00000539827 ZNF845Q96IR2 970 aaPredicted RBP19.9■□□□□ 0.78
HOMER3-204ENST00000539827 SF3B5Q9BWJ5 86 aaKnown RBP19.9■□□□□ 0.78
HOMER3-204ENST00000539827 MFRPQ9BY79 579 aa19.9■□□□□ 0.78
HOMER3-204ENST00000539827 GPR171O14626 319 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 SLC19A2O60779 497 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 CCL11P51671 97 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 SGCAQ16586 387 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 PYDC2Q56P42 97 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 ZNF544Q6NX49 715 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 CFAP77Q6ZQR2 320 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 OR10S1Q8NGN2 331 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 TSEN15Q8WW01 171 aaKnown RBP19.89■□□□□ 0.77
HOMER3-204ENST00000539827 C1orf198Q9H425 327 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 ZCCHC4Q9H5U6 513 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 ZNF552Q9H707 407 aaPredicted RBP19.89■□□□□ 0.77
HOMER3-204ENST00000539827 GDF2Q9UK05 429 aaPredicted RBP19.89■□□□□ 0.77
HOMER3-204ENST00000539827 ADAM30Q9UKF2 790 aa19.89■□□□□ 0.77
HOMER3-204ENST00000539827 PDCD5O14737 125 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 HNRNPCP07910 306 aaKnown RBP eCLIP19.88■□□□□ 0.77
HOMER3-204ENST00000539827 SNRPBP14678 240 aaKnown RBP19.88■□□□□ 0.77
HOMER3-204ENST00000539827 MAPK3P27361 379 aaPredicted RBP19.88■□□□□ 0.77
HOMER3-204ENST00000539827 APEX1P27695 318 aaKnown RBP19.88■□□□□ 0.77
HOMER3-204ENST00000539827 ARG2P78540 354 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 SRYQ05066 204 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 ASB18Q6ZVZ8 466 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 SAMD12Q8N8I0 201 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 DTX3Q8N9I9 347 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 OR5H6Q8NGV6 325 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 OR2AJ1Q8NGZ0 328 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 TCF7L1Q9HCS4 588 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 PHF3Q92576 2039 aaKnown RBP19.88■□□□□ 0.77
HOMER3-204ENST00000539827 TRBV5-7A0A0A0MS05 114 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 EIF4EP06730 217 aaKnown RBP19.88■□□□□ 0.77
HOMER3-204ENST00000539827 CD46P15529 392 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 SOX8P57073 446 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 SOSTQ9BQB4 213 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 BRD7Q9NPI1 651 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 OR52A1Q9UKL2 312 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 FLVCR1Q9Y5Y0 555 aa19.88■□□□□ 0.77
HOMER3-204ENST00000539827 CNOT1A5YKK6 2376 aaKnown RBP19.87■□□□□ 0.77
HOMER3-204ENST00000539827 ZNF716A6NP11 495 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 KLRC4-KLRK1H3BQV0 150 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 NR2C1P13056 603 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 P2RY14Q15391 338 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 KCNMB1Q16558 191 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 PDSS1Q5T2R2 415 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 HES5Q5TA89 166 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 DEGS2Q6QHC5 323 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 STAC2Q6ZMT1 411 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 PNPLA5Q7Z6Z6 429 aaPredicted RBP19.87■□□□□ 0.77
HOMER3-204ENST00000539827 TMEM106AQ96A25 262 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 G6PC2Q9NQR9 355 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 EXTL2Q9UBQ6 330 aa19.87■□□□□ 0.77
HOMER3-204ENST00000539827 TMEM269A0A1B0GVZ9 245 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 LINC01387J3KSC0 135 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 GLSO94925 669 aaPredicted RBP19.86■□□□□ 0.77
HOMER3-204ENST00000539827 ITGB2P05107 769 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 NTF4P34130 210 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 LHX2P50458 406 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 BCAP31P51572 246 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 IL18Q14116 193 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 C10orf128Q5T292 105 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 ABLIM2Q6H8Q1 611 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 PNPLA2Q96AD5 504 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 RBM24Q9BX46 236 aaKnown RBP19.86■□□□□ 0.77
HOMER3-204ENST00000539827 SLITRK2Q9H156 845 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 ASH2LQ9UBL3 628 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 TRAV8-7A0A075B6U6 113 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 A0A1B0GVC2 190 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 FUOMA2VDF0 154 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 A6NIN4 97 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 IL7P13232 177 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 PPIAP62937 165 aaKnown RBP19.86■□□□□ 0.77
HOMER3-204ENST00000539827 C20orf196Q8IYI0 205 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 HAS2Q92819 552 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 PPP1R3EQ9H7J1 279 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 FOXD3Q9UJU5 478 aaPredicted RBP19.86■□□□□ 0.77
HOMER3-204ENST00000539827 CLEC4AQ9UMR7 237 aa19.86■□□□□ 0.77
HOMER3-204ENST00000539827 DHHO43323 396 aa19.85■□□□□ 0.77
HOMER3-204ENST00000539827 ADRA2CP18825 462 aa19.85■□□□□ 0.77
HOMER3-204ENST00000539827 ZNF766Q5HY98 468 aa19.85■□□□□ 0.77
HOMER3-204ENST00000539827 KLHL24Q6TFL4 600 aa19.85■□□□□ 0.77
HOMER3-204ENST00000539827 METAP1DQ6UB28 335 aaPredicted RBP19.85■□□□□ 0.77
HOMER3-204ENST00000539827 FCRLAQ7L513 359 aa19.85■□□□□ 0.77
HOMER3-204ENST00000539827 LRRTM1Q86UE6 522 aa19.85■□□□□ 0.77
HOMER3-204ENST00000539827 GDPD1Q8N9F7 314 aa19.85■□□□□ 0.77
HOMER3-204ENST00000539827 OR4M1Q8NGD0 313 aa19.85■□□□□ 0.77
HOMER3-204ENST00000539827 SNRNP27Q8WVK2 155 aaKnown RBP19.85■□□□□ 0.77
HOMER3-204ENST00000539827 CPNE4Q96A23 557 aaPredicted RBP19.85■□□□□ 0.77
HOMER3-204ENST00000539827 ULBP2Q9BZM5 246 aa19.85■□□□□ 0.77
HOMER3-204ENST00000539827 ABRACLQ9P1F3 81 aa19.85■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms