RNA–Protein interactions for RNA: ENST00000538862.6

CDCA3-207, Transcript of cell division cycle associated 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDCA3, Length 1,943 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-207ENST00000538862 MRPL22Q9NWU5 206 aaKnown RBP13.06□□□□□ -0.32
CDCA3-207ENST00000538862 ING1Q9UK53 422 aaPredicted RBP13.06□□□□□ -0.32
CDCA3-207ENST00000538862 FREM2Q5SZK8 3169 aa13.06□□□□□ -0.32
CDCA3-207ENST00000538862 TMED7-TICAM2A0A0A6YYA0 188 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 CDC14CA4D256 554 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 OR6C65A6NJZ3 312 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 A8MVM7 634 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 SUSD5O60279 629 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 ITGA5P08648 1049 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 RRASP10301 218 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 CD37P11049 281 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 PRSS3P35030 304 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 EFNB2P52799 333 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 INSM1Q01101 510 aaPredicted RBP13.05□□□□□ -0.32
CDCA3-207ENST00000538862 KCNAB1Q14722 419 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 POMZP3Q6PJE2 187 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 IDO2Q6ZQW0 420 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 KRT77Q7Z794 578 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 COMMD7Q86VX2 200 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 ZNF454Q8N9F8 522 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 PNPLA2Q96AD5 504 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 C8orf44Q96CB5 159 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 OMA1Q96E52 524 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 NRSN2Q9GZP1 204 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 COPS7AQ9UBW8 275 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 KIF25Q9UIL4 384 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 PPIEQ9UNP9 301 aaKnown RBP13.05□□□□□ -0.32
CDCA3-207ENST00000538862 TMED7Q9Y3B3 224 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 TRAV18A0A075B6X5 111 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 SLC22A23A1A5C7 686 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 OR6C76A6NM76 312 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 HMSDA8MTL9 139 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 MCRIP1C9JLW8 97 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 LMO7DNF2Z398 122 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 L7N2F9 121 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 SULT1C2O00338 296 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 GMFGO60234 142 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 SLC16A7O60669 478 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 RGS11O94810 467 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 VSIG10L2P0DP72 767 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 CXCL2P19875 107 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 MAP2K6P52564 334 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 RIDAP52758 137 aaKnown RBP13.05□□□□□ -0.32
CDCA3-207ENST00000538862 HSD11B2P80365 405 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 C14orf28Q4W4Y0 310 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 C1orf140Q5VVS0 124 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 NKAIN2Q5VXU1 208 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 SLC29A4Q7RTT9 530 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 GRINAQ7Z429 371 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 ADGRG3Q86Y34 549 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 OR1N1Q8NGS0 311 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 STK35Q8TDR2 534 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 GPR119Q8TDV5 335 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 NUP50Q9UKX7 468 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 DHDHQ9UQ10 334 aa13.05□□□□□ -0.32
CDCA3-207ENST00000538862 ALPK2Q86TB3 2170 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 A0A1W2PPL8 197 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 PLPP3O14495 311 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 OR2T1O43869 369 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 FADS1O60427 444 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 PNPP00491 289 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 PLGP00747 810 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-207ENST00000538862 CD2P06729 351 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 MELTFP08582 738 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 SPARCP09486 303 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 ATXN8OSP0DMR3 200 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 GTF2F2P13984 249 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 ABCD3P28288 659 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 CRABP1P29762 137 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 NSDHLQ15738 373 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 AANATQ16613 207 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 NHLRC3Q5JS37 347 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 GLT8D1Q68CQ7 371 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 C3P1Q6ZMU1 363 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 SLC35D2Q76EJ3 337 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 CATSPERDQ86XM0 798 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 ASB13Q8WXK3 278 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 ELMOD3Q96FG2 381 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 SFXN2Q96NB2 322 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 ALX4Q9H161 411 aaPredicted RBP13.04□□□□□ -0.32
CDCA3-207ENST00000538862 DHCR7Q9UBM7 475 aaKnown RBP13.04□□□□□ -0.32
CDCA3-207ENST00000538862 CKLFQ9UBR5 152 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 SLC22A13Q9Y226 551 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 CPAMD8Q8IZJ3 1885 aa13.04□□□□□ -0.32
CDCA3-207ENST00000538862 LY6G6EA0A0G2JKS1 128 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 ZSCAN5BA6NJL1 495 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 RHPN2P1A8MT19 583 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 B8ZZF3 427 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 H3BSH0 61 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 I3L521 148 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 MEN1O00255 615 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 DKK1O94907 266 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 CTLA4P16410 223 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 FSTP19883 344 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 FBLP22087 321 aaKnown RBP13.03□□□□□ -0.32
CDCA3-207ENST00000538862 ARL4DP49703 201 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 ACTBP60709 375 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 ACTG1P63261 375 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 ADAM8P78325 824 aa13.03□□□□□ -0.32
CDCA3-207ENST00000538862 MPPED2Q15777 294 aa13.03□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms