RNA–Protein interactions for RNA: ENST00000538827.5

CD4-208, Transcript of CD4 molecule, humanhuman

TSL 1 (best)

Gene CD4, Length 985 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD4-208ENST00000538827 VKORC1Q9BQB6 163 aa12.42□□□□□ -0.42
CD4-208ENST00000538827 ZNF416Q9BWM5 594 aa12.42□□□□□ -0.42
CD4-208ENST00000538827 ASH2LQ9UBL3 628 aa12.42□□□□□ -0.42
CD4-208ENST00000538827 GNG8Q9UK08 70 aa12.42□□□□□ -0.42
CD4-208ENST00000538827 LHFPL6Q9Y693 200 aa12.42□□□□□ -0.42
CD4-208ENST00000538827 CRYBG3Q68DQ2 2970 aa12.42□□□□□ -0.42
CD4-208ENST00000538827 PRRC2CQ9Y520 2896 aaKnown RBP12.41□□□□□ -0.42
CD4-208ENST00000538827 TMEM129A0AVI4 362 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 CIB4A0PJX0 185 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 RPL36A-HNRNPH2H7BZ11 118 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 J3QLW9 94 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 CCL21O00585 134 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 MAGEB4O15481 346 aaPredicted RBP12.41□□□□□ -0.42
CD4-208ENST00000538827 RAD51DO75771 328 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 LYZL6O75951 148 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 KRT8P05787 483 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 ZNF19P17023 458 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 PCMT1P22061 227 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 IGHV1-2P23083 117 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 OPRM1P35372 400 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 SH3BGRP55822 239 aaPredicted RBP12.41□□□□□ -0.42
CD4-208ENST00000538827 WNT4P56705 351 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 BLMHQ13867 455 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 ENDOGQ14249 297 aaKnown RBP12.41□□□□□ -0.42
CD4-208ENST00000538827 STK11Q15831 433 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 KCNMB1Q16558 191 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 KRTAP21-3Q3LHN1 58 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 CFAP77Q6ZQR2 320 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 SLC16A14Q7RTX9 510 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 LUZP2Q86TE4 346 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 FJX1Q86VR8 437 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 SLC22A24Q8N4F4 322 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 NANOGP1Q8N7R0 232 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 YIPF7Q8N8F6 280 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 ZNF610Q8N9Z0 462 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 OR1K1Q8NGR3 316 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 OR52N1Q8NH53 320 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 OR52N5Q8NH56 324 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 GATAD2BQ8WXI9 593 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 ASB17Q8WXJ9 295 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 RND1Q92730 232 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 MUL1Q969V5 352 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 OR5M11Q96RB7 305 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 DMRTA2Q96SC8 542 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 MYCBPQ99417 103 aaPredicted RBP12.41□□□□□ -0.42
CD4-208ENST00000538827 ABHD6Q9BV23 337 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 KCNN2Q9H2S1 579 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 SIAEQ9HAT2 523 aa12.41□□□□□ -0.42
CD4-208ENST00000538827 GDF2Q9UK05 429 aaPredicted RBP12.41□□□□□ -0.42
CD4-208ENST00000538827 CAB39Q9Y376 341 aaPredicted RBP12.41□□□□□ -0.42
CD4-208ENST00000538827 PRR32B1ATL7 298 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 DVL2O14641 736 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 INMTO95050 263 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 MT-ND5P03915 603 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 CST2P09228 141 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 CD8BP10966 210 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 ALOX5APP20292 161 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 HOXC12P31275 282 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 NR1H2P55055 460 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 LSM6P62312 80 aaKnown RBP12.4□□□□□ -0.42
CD4-208ENST00000538827 AQP6Q13520 282 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 TSC22D1Q15714 1073 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 TIGD6Q17RP2 521 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 TEX30Q5JUR7 227 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 UBE2UQ5VVX9 321 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 RNLSQ5VYX0 342 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 XAF1Q6GPH4 301 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 LRRN1Q6UXK5 716 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 PLEKHG7Q6ZR37 379 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 Q6ZT83 130 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 KLBQ86Z14 1044 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 SLAMF6Q96DU3 332 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 PIGMQ9H3S5 423 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 C1orf198Q9H425 327 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 RNF121Q9H920 327 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 ISG20L2Q9H9L3 353 aaKnown RBP12.4□□□□□ -0.42
CD4-208ENST00000538827 PLSCR4Q9NRQ2 329 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 CENPMQ9NSP4 180 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 ACOXLQ9NUZ1 547 aa12.4□□□□□ -0.42
CD4-208ENST00000538827 SETD2Q9BYW2 2564 aaPredicted RBP12.39□□□□□ -0.43
CD4-208ENST00000538827 PNMA8CA0A1B0GUJ8 204 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 RPP14O95059 124 aaKnown RBP12.39□□□□□ -0.43
CD4-208ENST00000538827 IL18BPO95998 194 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 CGAP01215 116 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 H2BFMP0C1H6 154 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 PATE4P0C8F1 98 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 CD79AP11912 226 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 GNLYP22749 145 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 PSMB10P40306 273 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 RPL5P46777 297 aaKnown RBP12.39□□□□□ -0.43
CD4-208ENST00000538827 UQCRFS1P47985 274 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 OR12D2P58182 307 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 TUBA1BP68363 451 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 TGFBR3Q03167 851 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 SCRN3Q0VDG4 424 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 RAB39AQ14964 217 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 SPHARQ15513 63 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 TAF13Q15543 124 aa12.39□□□□□ -0.43
CD4-208ENST00000538827 TSTQ16762 297 aaKnown RBP12.39□□□□□ -0.43
CD4-208ENST00000538827 CDONQ4KMG0 1287 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms