RNA–Protein interactions for RNA: ENST00000538333.3

LIMK1-208, Transcript of LIM domain kinase 1, humanhuman

TSL 2 BASIC

Gene LIMK1, Length 2,170 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK1-208ENST00000538333 SYPP08247 313 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 COX6A1P12074 109 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 CXCL3P19876 107 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 ACHEP22303 614 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 DCTDP32321 178 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 ZXDAP98168 799 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 SNTA1Q13424 505 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 RAB11BQ15907 218 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 ZNF239Q16600 458 aaKnown RBP12.49□□□□□ -0.41
LIMK1-208ENST00000538333 C2orf76Q3KRA6 126 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 LRFN4Q6PJG9 635 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 FGD2Q7Z6J4 655 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 UEVLDQ8IX04 471 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 BEST4Q8NFU0 473 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 GON7Q9BXV9 100 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 TMEM165Q9HC07 324 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 SLC17A5Q9NRA2 495 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 CYB5R1Q9UHQ9 305 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 GPN3Q9UHW5 284 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-208ENST00000538333 FLVCR2Q9UPI3 526 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 MED12Q93074 2177 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 COL27A1Q8IZC6 1860 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-208ENST00000538333 LOC101059948A0A1B0GTJ6 334 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 TMEM269A0A1B0GVZ9 245 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 H7C417 338 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 PGA4P0DJD7 388 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 PGA3P0DJD8 388 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 ADH6P28332 368 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 DUSP3P51452 185 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-208ENST00000538333 MMP16P51512 607 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 MC2RQ01718 297 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 TRIM61Q5EBN2 209 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 THEM4Q5T1C6 240 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 PRAMEF20Q5VT98 475 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 TMEM81Q6P7N7 255 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 PIAS4Q8N2W9 510 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-208ENST00000538333 OR51A2Q8NGJ7 313 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 OR10S1Q8NGN2 331 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 MR1Q95460 341 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 PHF21AQ96BD5 680 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 SLC25A44Q96H78 314 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-208ENST00000538333 HYLS1Q96M11 299 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 RBP7Q96R05 134 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 OR5B2Q96R09 309 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 NKX3-1Q99801 234 aaPredicted RBP12.49□□□□□ -0.41
LIMK1-208ENST00000538333 ZFP64Q9NPA5 681 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 CKLFQ9UBR5 152 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 MTFP1Q9UDX5 166 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 PTRH2Q9Y3E5 179 aaKnown RBP12.49□□□□□ -0.41
LIMK1-208ENST00000538333 HS3ST3B1Q9Y662 390 aa12.49□□□□□ -0.41
LIMK1-208ENST00000538333 TMEM272A0A1B0GTI8 110 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 TEX51A0A1B0GUA7 166 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 TP53I11O14683 189 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 DOK2O60496 412 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 KDM4BO94953 1096 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 HPXP02790 462 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 ALDOBP05062 364 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 SULT1A3P0DMM9 295 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 SULT1A4P0DMN0 295 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 LAP3P28838 519 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 GPR85P60893 370 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 FAAP20Q6NZ36 180 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 SEZ6L2Q6UXD5 910 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 ZNF704Q6ZNC4 412 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-208ENST00000538333 NOXO1Q8NFA2 376 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 OR4K17Q8NGC6 315 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 SLC25A43Q8WUT9 341 aaPredicted RBP12.48□□□□□ -0.41
LIMK1-208ENST00000538333 NTNG2Q96CW9 530 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 FAM206AQ9NX38 181 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 NKIRAS2Q9NYR9 191 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 EMC3Q9P0I2 261 aa12.48□□□□□ -0.41
LIMK1-208ENST00000538333 RAMP1O60894 148 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 H2BFMP0C1H6 154 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 ANXA3P12429 323 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 EIF1P41567 113 aaKnown RBP12.47□□□□□ -0.41
LIMK1-208ENST00000538333 CAMK2DQ13557 499 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 EXT1Q16394 746 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 GLT8D1Q68CQ7 371 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 SLC23A3Q6PIS1 610 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 LYPD6Q86Y78 171 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 C1orf210Q8IVY1 113 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 OR13C3Q8NGS6 347 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 DEDD2Q8WXF8 326 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 SLAMF6Q96DU3 332 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 UTP23Q9BRU9 249 aaKnown RBP12.47□□□□□ -0.41
LIMK1-208ENST00000538333 PTGES2Q9H7Z7 377 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 DIABLOQ9NR28 239 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 CENPMQ9NSP4 180 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 STMN3Q9NZ72 180 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 MRPS18BQ9Y676 258 aaKnown RBP12.47□□□□□ -0.41
LIMK1-208ENST00000538333 LOC390937A0A1W2PQ73 354 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 AKR7A2O43488 359 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 LMX1BO60663 402 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 PRAF2O60831 178 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 ZNF780AO75290 641 aaPredicted RBP12.47□□□□□ -0.41
LIMK1-208ENST00000538333 TGM6O95932 706 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 IGHG1P01857 330 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 UBCP0CG48 685 aaKnown RBP12.47□□□□□ -0.41
LIMK1-208ENST00000538333 HTR2CP28335 458 aa12.47□□□□□ -0.41
LIMK1-208ENST00000538333 VEGFCP49767 419 aa12.47□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms