RNA–Protein interactions for RNA: ENST00000538224.1

USP28-206, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 3

Gene USP28, Length 582 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-206ENST00000538224 POLR1DQ9Y2S0 133 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 CHCHD2Q9Y6H1 151 aaPredicted RBP5.93□□□□□ -1.46
USP28-206ENST00000538224 KIF26BQ2KJY2 2108 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 EML6Q6ZMW3 1958 aa5.93□□□□□ -1.46
USP28-206ENST00000538224 TRAV6A0A075B6T7 132 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 A0A0A6YYJ9 748 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 A0A1B0GVC2 190 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 TMEM269A0A1B0GVZ9 245 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 LOC390937A0A1W2PQ73 354 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 GGT3PA6NGU5 568 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 A6NIN4 97 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 ZNF726A6NNF4 738 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 A8MV72 311 aaPredicted RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 H7C417 338 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 TRAF3IP2O43734 574 aaPredicted RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 CTAG2O75638 210 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 GPANK1O95872 356 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 APOC1P02654 83 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 MT-ND4P03905 459 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 IL5P05113 134 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 PGA4P0DJD7 388 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 PGA3P0DJD8 388 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 CD37P11049 281 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 HLA-DOBP13765 273 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 GABRA1P14867 456 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 RAB6AP20340 208 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 IL11P20809 199 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 HTR2CP28335 458 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 HSD11B1P28845 292 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 RPS27P42677 84 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 POU3F4P49335 361 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 SRP9P49458 86 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 RGS19P49795 217 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 MECP2P51608 486 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 AGFG1P52594 562 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 CLDN12P56749 244 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 GRB2P62993 217 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 MFGE8Q08431 387 aaPredicted RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 CAMK2BQ13554 666 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 RBMS2Q15434 407 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 GSG1Q2KHT4 349 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 ZNF528Q3MIS6 628 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 RNASE12Q5GAN4 147 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 DCAF12Q5T6F0 453 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 FAM166AQ6J272 317 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 SLC25A25Q6KCM7 469 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 ZNF782Q6ZMW2 699 aaPredicted RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 ESPNLQ6ZVH7 1005 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 Q7L0L9 218 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 ZSCAN2Q7Z7L9 614 aaPredicted RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 GLCCI1Q86VQ1 547 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 LSRQ86X29 649 aaPredicted RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 SERPINA12Q8IW75 414 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 CDH26Q8IXH8 852 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 TMEM156Q8N614 296 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 POC1BQ8TC44 478 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 PAQR8Q8TEZ7 354 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 ASB13Q8WXK3 278 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 C11orf40Q8WZ69 217 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 DACT3Q96B18 629 aaPredicted RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 INTS12Q96CB8 462 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 SLAMF6Q96DU3 332 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 DNAJA3Q96EY1 480 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 TMEM41AQ96HV5 264 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 LOXL4Q96JB6 756 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 SORCS2Q96PQ0 1159 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 FYTTD1Q96QD9 318 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 OR5B2Q96R09 309 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 TMEM246Q9BRR3 403 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 UQCC2Q9BRT2 126 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 UTP23Q9BRU9 249 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 MRPL13Q9BYD1 178 aaKnown RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 HRASLSQ9HDD0 168 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 HPF1Q9NWY4 346 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 MED29Q9NX70 200 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 PAQR5Q9NXK6 330 aaPredicted RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 B3GAT1Q9P2W7 334 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 UPB1Q9UBR1 384 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 MTFP1Q9UDX5 166 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 CYB5R1Q9UHQ9 305 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 ING1Q9UK53 422 aaPredicted RBP5.92□□□□□ -1.46
USP28-206ENST00000538224 DKKL1Q9UK85 242 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 FBXL3Q9UKT7 428 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 EMC9Q9Y3B6 208 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 HS3ST3B1Q9Y662 390 aa5.92□□□□□ -1.46
USP28-206ENST00000538224 PHF3Q92576 2039 aaKnown RBP5.91□□□□□ -1.46
USP28-206ENST00000538224 MEIKINA0A087WXM9 373 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 A0A1W2PPL8 197 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 C2orf72A6NCS6 295 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 METTL21EPA6NDL7 271 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 SNRPGP15A8MWD9 76 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 SULT2B1O00204 365 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 SSNA1O43805 119 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 CBR3O75828 277 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 KLF7O75840 302 aaPredicted RBP5.91□□□□□ -1.46
USP28-206ENST00000538224 NDUFB6O95139 128 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 PNPP00491 289 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 HPP00738 406 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 UMODP07911 640 aa5.91□□□□□ -1.46
USP28-206ENST00000538224 ADRB1P08588 477 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms