RNA–Protein interactions for RNA: ENST00000538136.1

MSH6-209, Transcript of mutS homolog 6, humanhuman

TSL 2 BASIC

Gene MSH6, Length 4,055 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH6-209ENST00000538136 PLEKHB1Q9UF11 243 aaPredicted RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 CLEC2DQ9UHP7 191 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 DENND4AQ7Z401 1863 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 HSPA12AO43301 675 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 AKR7A2O43488 359 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 PCBP3P57721 371 aaKnown RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 EGR4Q05215 589 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 FAM201AQ5SY85 155 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 BCL2L15Q5TBC7 163 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 RGS7BPQ6MZT1 257 aaPredicted RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 FAHD2BQ6P2I3 314 aaPredicted RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 ZNF620Q6ZNG0 422 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 PEG10Q86TG7 708 aaKnown RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 ADCK1Q86TW2 530 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 SLC35F2Q8IXU6 374 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 OR13C5Q8NGS8 318 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 OR4Q3Q8NH05 313 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 HDAC2Q92769 488 aaKnown RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 FAHD2AQ96GK7 314 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 RNF170Q96K19 258 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 C7orf34Q96L11 122 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 ZFP3Q96NJ6 502 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 TXNIPQ9H3M7 391 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 LIME1Q9H400 295 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 PLK3Q9H4B4 646 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 ESRP2Q9H6T0 727 aaKnown RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 CRIM1Q9NZV1 1036 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 TAAR3PQ9P1P4 343 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 ABCD2Q9UBJ2 740 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 RPL36Q9Y3U8 105 aaKnown RBP6.38□□□□□ -1.39
MSH6-209ENST00000538136 PMF1-BGLAPU3KQ54 211 aa6.38□□□□□ -1.39
MSH6-209ENST00000538136 A0A1W2PRQ8 180 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 SERTM1A2A2V5 107 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 ANKRD30BLA7E2S9 258 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 ANGPTL7O43827 346 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 FZD7O75084 574 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 NDUFS7O75251 213 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 C1QL1O75973 258 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 HTR3BO95264 441 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 CLDN14O95500 239 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 CLDN18P56856 261 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 BRICD5Q6PL45 260 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 FGD2Q7Z6J4 655 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 SERPINA12Q8IW75 414 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 OR13C3Q8NGS6 347 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 WFIKKN1Q96NZ8 548 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 DUX5Q96PT3 197 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 SIGLEC7Q9Y286 467 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 IGKV1D-43A0A0B4J1Z2 117 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 FAM221AA4D161 298 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 MT-ATP6P00846 226 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 FAHP16930 419 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 SPI1P17947 270 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 CFL1P23528 166 aaKnown RBP6.37□□□□□ -1.39
MSH6-209ENST00000538136 CALRP27797 417 aaKnown RBP6.37□□□□□ -1.39
MSH6-209ENST00000538136 SDHAP31040 664 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 CAV3P56539 151 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 BSPH1Q075Z2 132 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 MAPK11Q15759 364 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 RNF220Q5VTB9 566 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 ZNF627Q7L945 461 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 HDDC2Q7Z4H3 204 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 SKA3Q8IX90 412 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 RFLNBQ8N5W9 214 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 LIPHQ8WWY8 451 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 IL1F10Q8WWZ1 152 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 SLAMF6Q96DU3 332 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 GMPPAQ96IJ6 420 aaPredicted RBP6.37□□□□□ -1.39
MSH6-209ENST00000538136 TECTBQ96PL2 329 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 ALG8Q9BVK2 526 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 GDF2Q9UK05 429 aaPredicted RBP6.37□□□□□ -1.39
MSH6-209ENST00000538136 CHST2Q9Y4C5 530 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 ARHGAP32A7KAX9 2087 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 TRBV5-3A0A0A0MS03 114 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 C7orf72A4D263 438 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 TO15178 435 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 TBX19O60806 448 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 CLPSP04118 112 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 SERPINB10P48595 397 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 SNRPD2P62316 118 aaKnown RBP6.37□□□□□ -1.39
MSH6-209ENST00000538136 ARFRP1Q13795 201 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 PGM2L1Q6PCE3 622 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 ZNF704Q6ZNC4 412 aaPredicted RBP6.37□□□□□ -1.39
MSH6-209ENST00000538136 PXKQ7Z7A4 578 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 TSPAN14Q8NG11 270 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 MYDGFQ969H8 173 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 MARVELD3Q96A59 401 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 SH2D2AQ9NP31 389 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 COMMD3Q9UBI1 195 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 B9D1Q9UPM9 204 aa6.37□□□□□ -1.39
MSH6-209ENST00000538136 COL6A5A8TX70 2615 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 SLC22A31A6NKX4 558 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 GPRIN2O60269 458 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 EPPINO95925 133 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 MT-ND2P03891 347 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 ADRA2AP08913 450 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 TACSTD2P09758 323 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 STOMP27105 288 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 AGTR1P30556 359 aa6.36□□□□□ -1.39
MSH6-209ENST00000538136 SUMO3P55854 103 aaPredicted RBP6.36□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms