RNA–Protein interactions for RNA: ENST00000538026.5

SPARC-208, Transcript of secreted protein acidic and cysteine rich, humanhuman

TSL 5

Gene SPARC, Length 576 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPARC-208ENST00000538026 FNDC8Q8TC99 324 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 MARS2Q96GW9 593 aaKnown RBP7.19□□□□□ -1.26
SPARC-208ENST00000538026 POM121Q96HA1 1249 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 FEVQ99581 238 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 VRK1Q99986 396 aaPredicted RBP7.19□□□□□ -1.26
SPARC-208ENST00000538026 IFT27Q9BW83 186 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 NMNAT2Q9BZQ4 307 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 TPK1Q9H3S4 243 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 RERGLQ9H628 205 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 BARX1Q9HBU1 254 aaPredicted RBP7.19□□□□□ -1.26
SPARC-208ENST00000538026 SRA1Q9HD15 236 aaKnown RBP7.19□□□□□ -1.26
SPARC-208ENST00000538026 PNRC2Q9NPJ4 139 aaKnown RBP7.19□□□□□ -1.26
SPARC-208ENST00000538026 KLHL21Q9UJP4 597 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 TMCC3Q9ULS5 477 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 TIMM10BQ9Y5J6 103 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 CDH10Q9Y6N8 788 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 PMF1-BGLAPU3KQ54 211 aa7.19□□□□□ -1.26
SPARC-208ENST00000538026 DYSFO75923 2080 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 IGHV4-61A0A0C4DH41 118 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 C5orf63A6NC05 138 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 XKRYO14609 159 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 SOX14O95416 240 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 CLUP10909 449 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 PRKACGP22612 351 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 COL8A2P25067 703 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 NOS3P29474 1203 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 PYCR1P32322 319 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 RPS27P42677 84 aaKnown RBP7.18□□□□□ -1.26
SPARC-208ENST00000538026 RPS6KA3P51812 740 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 LSM6P62312 80 aaKnown RBP7.18□□□□□ -1.26
SPARC-208ENST00000538026 HSF2Q03933 536 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 KHDRBS1Q07666 443 aaKnown RBP eCLIP7.18□□□□□ -1.26
SPARC-208ENST00000538026 CCNIQ14094 377 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 DNAL1Q4LDG9 190 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 SPATA46Q5T0L3 261 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 ACSM5Q6NUN0 579 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 LNX2Q8N448 690 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 IQCF1Q8N6M8 205 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 SLC37A3Q8NCC5 494 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 OR10G2Q8NGC3 310 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 OR52E2Q8NGJ4 325 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 OR10S1Q8NGN2 331 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 SLC25A40Q8TBP6 338 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 YIPF5Q969M3 257 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 SNX18Q96RF0 628 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 SOX7Q9BT81 388 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 RBM4Q9BWF3 364 aaKnown RBP7.18□□□□□ -1.26
SPARC-208ENST00000538026 HCAR1Q9BXC0 346 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 CDH20Q9HBT6 801 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 CCNB1IP1Q9NPC3 277 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 RPRD1BQ9NQG5 326 aaKnown RBP7.18□□□□□ -1.26
SPARC-208ENST00000538026 ARMC1Q9NVT9 282 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 TAAR3PQ9P1P4 343 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 ASH2LQ9UBL3 628 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 DUSP13Q9UII6 198 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 FBXL3Q9UKT7 428 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 STARD10Q9Y365 291 aa7.18□□□□□ -1.26
SPARC-208ENST00000538026 TANC2Q9HCD6 1990 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 IQCMA0A1B0GVH7 501 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 C12orf71A8MTZ7 269 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 INAFM1C9JVW0 142 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 WNT9BO14905 357 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 IDH3BO43837 385 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 LILRA1O75019 489 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 FKBP6O75344 327 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 RP2O75695 350 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 STAMBPO95630 424 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 CST1P01037 141 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 IGHV3-13P01766 116 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 COX5BP10606 129 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 DAOP14920 347 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 CCNOP22674 350 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 GIFP27352 417 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 IL2RGP31785 369 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 APLNRP35414 380 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 IFNGR2P38484 337 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 NR4A2P43354 598 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 MAGEB1P43366 347 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 GDI2P50395 445 aaKnown RBP7.17□□□□□ -1.26
SPARC-208ENST00000538026 MMP15P51511 669 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 GALK2Q01415 458 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 PLP2Q04941 152 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 LOXL1Q08397 574 aaPredicted RBP7.17□□□□□ -1.26
SPARC-208ENST00000538026 COX10Q12887 443 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 RIN1Q13671 783 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 CRMP1Q14194 572 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 FLOT2Q14254 428 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 TBC1D28Q2M2D7 210 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 LINC01590Q5TEZ4 76 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 RGS7BPQ6MZT1 257 aaPredicted RBP7.17□□□□□ -1.26
SPARC-208ENST00000538026 SLC18B1Q6NT16 456 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 CLEC2AQ6UVW9 174 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 CFAP77Q6ZQR2 320 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 ASRGL1Q7L266 308 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 ZSCAN2Q7Z7L9 614 aaPredicted RBP7.17□□□□□ -1.26
SPARC-208ENST00000538026 NAA40Q86UY6 237 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 SPATA24Q86W54 205 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 LINC00471Q8N535 108 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 OR51L1Q8NGJ5 315 aa7.17□□□□□ -1.26
SPARC-208ENST00000538026 OR1J2Q8NGS2 313 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms