RNA–Protein interactions for RNA: ENST00000536429.1

PRKDC-206, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

TSL 3

Gene PRKDC, Length 659 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-206ENST00000536429 RIPPLY3P57055 190 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 PCBD1P61457 104 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 GLO1Q04760 184 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.28□□□□□ -0.6
PRKDC-206ENST00000536429 CARTPTQ16568 116 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 CCDC92Q53HC0 331 aaPredicted RBP11.28□□□□□ -0.6
PRKDC-206ENST00000536429 ZNF362Q5T0B9 420 aaPredicted RBP11.28□□□□□ -0.6
PRKDC-206ENST00000536429 VASH1Q7L8A9 365 aaPredicted RBP11.28□□□□□ -0.6
PRKDC-206ENST00000536429 SYT9Q86SS6 491 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 HS3ST5Q8IZT8 346 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 CYB561A3Q8NBI2 242 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 OR10G2Q8NGC3 310 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 OR1J1Q8NGS3 322 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 ZNRF4Q8WWF5 429 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 SLC7A6Q92536 515 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 DDOQ99489 341 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 DGCR6LQ9BY27 220 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 RAB1BQ9H0U4 201 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 LRMDAQ9H2I8 198 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 POFUT1Q9H488 388 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 ARMC1Q9NVT9 282 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 IL20Q9NYY1 176 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 TAAR3PQ9P1P4 343 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 ASH2LQ9UBL3 628 aa11.28□□□□□ -0.6
PRKDC-206ENST00000536429 IGLV3-9A0A075B6K5 115 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 A0A1W2PPW3 197 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 VWC2LB2RUY7 222 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 M0R233 179 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 RER1O15258 196 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 SGCEO43556 437 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 DOK2O60496 412 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 RENP00797 406 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 TFP02787 698 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 ZNF250P15622 560 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 NOS3P29474 1203 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 CRABP1P29762 137 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 RAD52P43351 418 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 HTR5AP47898 357 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 PDLIM4P50479 330 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 DSCR9P59020 149 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 CORO6Q6QEF8 472 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 LYPD4Q6UWN0 246 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 ALDH16A1Q8IZ83 802 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 LINC00471Q8N535 108 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 OR52L1Q8NGH7 329 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 ABHD4Q8TB40 342 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 SYNPRQ8TBG9 265 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 SLC25A40Q8TBP6 338 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 SNX18Q96RF0 628 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 FEVQ99581 238 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 TSSK6Q9BXA6 273 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 BCL2L14Q9BZR8 327 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 RACGAP1Q9H0H5 632 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 TBC1D23Q9NUY8 699 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 LHFPL6Q9Y693 200 aa11.27□□□□□ -0.61
PRKDC-206ENST00000536429 IDH3BO43837 385 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 FKBP6O75344 327 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 NCR1O76036 304 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 HPXP02790 462 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 DBHP09172 617 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 PSKH1P11801 424 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 DAOP14920 347 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 PYCR1P32322 319 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 KLF3P57682 345 aaPredicted RBP11.26□□□□□ -0.61
PRKDC-206ENST00000536429 LSM6P62312 80 aaKnown RBP11.26□□□□□ -0.61
PRKDC-206ENST00000536429 SCRN3Q0VDG4 424 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 AQP6Q13520 282 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 KCNMB1Q16558 191 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 ELFN2Q5R3F8 820 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 ZBTB46Q86UZ6 589 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 LINC00346Q8IVM7 164 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 IQCF1Q8N6M8 205 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 SLC37A3Q8NCC5 494 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 SLC26A10Q8NG04 563 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 GIPC3Q8TF64 312 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 IPCEF1Q8WWN9 437 aaPredicted RBP11.26□□□□□ -0.61
PRKDC-206ENST00000536429 NEU4Q8WWR8 484 aaPredicted RBP11.26□□□□□ -0.61
PRKDC-206ENST00000536429 POP5Q969H6 163 aaKnown RBP11.26□□□□□ -0.61
PRKDC-206ENST00000536429 MARS2Q96GW9 593 aaKnown RBP11.26□□□□□ -0.61
PRKDC-206ENST00000536429 C4orf45Q96LM5 186 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 OR2J1Q9GZK6 312 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 BPESC1Q9GZL8 116 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 MRPL22Q9NWU5 206 aaKnown RBP11.26□□□□□ -0.61
PRKDC-206ENST00000536429 PLEK2Q9NYT0 353 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 CR1P17927 2039 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 DNHD1Q96M86 4753 aa11.26□□□□□ -0.61
PRKDC-206ENST00000536429 IGHV4-61A0A0C4DH41 118 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 OR6C6A6NF89 314 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 INAFM1C9JVW0 142 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 ICMTO60725 284 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 CSF3P09919 207 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 COX5BP10606 129 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 SLC25A16P16260 332 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 PRKACGP22612 351 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 NR4A2P43354 598 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 MAGEB1P43366 347 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 PPP1CBP62140 327 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 HIST1H3AP68431 136 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 CBX1P83916 185 aa11.25□□□□□ -0.61
PRKDC-206ENST00000536429 TEKQ02763 1124 aa11.25□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms