RNA–Protein interactions for RNA: ENST00000536145.3

CPSF7-215, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 546 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-215ENST00000536145 ARV1Q9H2C2 271 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 CHRDQ9H2X0 955 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 TMPRSS5Q9H3S3 457 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 KIR3DX1Q9H7L2 352 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 LYRM4Q9HD34 91 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 CHMP1AQ9HD42 196 aaPredicted RBP6.23□□□□□ -1.41
CPSF7-215ENST00000536145 PARP11Q9NR21 331 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP6.23□□□□□ -1.41
CPSF7-215ENST00000536145 CUTCQ9NTM9 273 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 TREM2Q9NZC2 230 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 GDE1Q9NZC3 331 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 STARD10Q9Y365 291 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 TMED7Q9Y3B3 224 aa6.23□□□□□ -1.41
CPSF7-215ENST00000536145 MRPS18BQ9Y676 258 aaKnown RBP6.23□□□□□ -1.41
CPSF7-215ENST00000536145 HEATR5BQ9P2D3 2071 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 TBC1D3DA0A087WVF3 549 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 EDDM13A0A1B0GTR0 161 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 SYNDIG1LA6NDD5 238 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 IFITM10A6NMD0 228 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ZNF705EA8MWA4 302 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 TBC1D3LB9A6J9 549 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 RAB27BO00194 218 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 CYR61O00622 381 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 KCNAB3O43448 404 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 TNFSF14O43557 240 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 STK17BO94768 372 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 SLC34A2O95436 690 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 SFT2D2O95562 160 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 GPR75O95800 540 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 PNPP00491 289 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 PLGP00747 810 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 LRG1P02750 347 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 CSTBP04080 98 aaKnown RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 PCCBP05166 539 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 DCNP07585 359 aaKnown RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ERCC1P07992 297 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ASAH2BP0C7U1 165 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 LIPCP11150 499 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 SELLP14151 372 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 TBPP20226 339 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 RAB5AP20339 215 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 RPL4P36578 427 aaKnown RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 PBX2P40425 430 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 AQP2P41181 271 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 PPT1P50897 306 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 DVL1P1P54792 670 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 TAS2R31P59538 309 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 CYCSP99999 105 aaKnown RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 PSG6Q00889 435 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ID2Q02363 134 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ROM1Q03395 351 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 SRSF5Q13243 272 aaKnown RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 FAM53BQ14153 422 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 DHCR24Q15392 516 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ZNF74Q16587 644 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 Q3ZCU0 254 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 MESTQ5EB52 335 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 RNASE10Q5GAN6 216 aaKnown RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 FNDC7Q5VTL7 733 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 NSUN5P2Q63ZY6 315 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 LHX8Q68G74 356 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 TBC1D3CQ6IPX1 549 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 DGAT2L6Q6ZPD8 337 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 RHOUQ7L0Q8 258 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 MAMDC2Q7Z304 686 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 NUP54Q7Z3B4 507 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ATG4DQ86TL0 474 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 FJX1Q86VR8 437 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 TMEM200AQ86VY9 491 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 CATSPERDQ86XM0 798 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 GKN2Q86XP6 184 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ETFBKMTQ8IXQ9 262 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 TBC1D3Q8IZP1 549 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 OR4E2Q8NGC2 313 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 OR10R2Q8NGX6 335 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ASB5Q8WWX0 329 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 DCUN1D4Q92564 292 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 GTF3AQ92664 365 aaKnown RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 COL26A1Q96A83 441 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 RAB7BQ96AH8 199 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 OR2A5Q96R48 311 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 LMF1Q96S06 567 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ZNF587Q96SQ5 575 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 MICU1Q9BPX6 476 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 NUDT16L1Q9BRJ7 211 aaKnown RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 NUDT9Q9BW91 350 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ULBP3Q9BZM4 244 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 ZBP1Q9H171 429 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 SLC26A1Q9H2B4 701 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 UCK1Q9HA47 277 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 RAB18Q9NP72 206 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 MBNL1Q9NR56 388 aaKnown RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 RYDENQ9NUL5 291 aaKnown RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 HCFC1R1Q9NWW0 138 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 TAS2R4Q9NYW5 299 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 OR5AC2Q9NZP5 309 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 FBLN5Q9UBX5 448 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 DPP7Q9UHL4 492 aa6.22□□□□□ -1.41
CPSF7-215ENST00000536145 GDF2Q9UK05 429 aaPredicted RBP6.22□□□□□ -1.41
CPSF7-215ENST00000536145 SLC22A13Q9Y226 551 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms