RNA–Protein interactions for RNA: ENST00000536011.5

RTN3-207, Transcript of reticulon 3, humanhuman

TSL 2

Gene RTN3, Length 992 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN3-207ENST00000536011 KCTD14Q9BQ13 255 aaPredicted RBP11.16□□□□□ -0.62
RTN3-207ENST00000536011 POLE4Q9NR33 117 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 RPS6KA6Q9UK32 745 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 FAM32AQ9Y421 112 aaKnown RBP11.16□□□□□ -0.62
RTN3-207ENST00000536011 SNX13Q9Y5W8 968 aa11.16□□□□□ -0.62
RTN3-207ENST00000536011 A0A087WUU8 490 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 ISPDA4D126 451 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 PRSS37A4D1T9 235 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 J3KTA2 159 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 NME4O00746 187 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 FFAR1O14842 300 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 DOK2O60496 412 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 IGHV2-5P01817 119 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 CD55P08174 381 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 MPV17P39210 176 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 HTR5AP47898 357 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 GSK3BP49841 420 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 NUDT2P50583 147 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 AQP6Q13520 282 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 ENDOGQ14249 297 aaKnown RBP11.15□□□□□ -0.62
RTN3-207ENST00000536011 MTX3Q5HYI7 312 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 GPR139Q6DWJ6 353 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 ADCK1Q86TW2 530 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 CLDN22Q8N7P3 220 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 GTF3AQ92664 365 aaKnown RBP11.15□□□□□ -0.62
RTN3-207ENST00000536011 CMTM5Q96DZ9 223 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 NMNAT1Q9HAN9 279 aaPredicted RBP11.15□□□□□ -0.62
RTN3-207ENST00000536011 MED4Q9NPJ6 270 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 TBCCD1Q9NVR7 557 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 ENPP4Q9Y6X5 453 aa11.15□□□□□ -0.62
RTN3-207ENST00000536011 TEX13CA0A0J9YWL9 993 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 A0A1W2PRQ8 180 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 ZSCAN5BA6NJL1 495 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 H7C1C5 153 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 J3QW42 95 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 SURF4O15260 269 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 SGCEO43556 437 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 PLPP2O43688 288 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 DEAF1O75398 565 aaPredicted RBP11.14□□□□□ -0.63
RTN3-207ENST00000536011 UBOX5O94941 541 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 NDUFB2O95178 105 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 H1F0P07305 194 aaKnown RBP11.14□□□□□ -0.63
RTN3-207ENST00000536011 TNFRSF1AP19438 455 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 EPHA1P21709 976 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 SDHAP31040 664 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 LCN6P62502 163 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 KRR1Q13601 381 aaKnown RBP11.14□□□□□ -0.63
RTN3-207ENST00000536011 DGCR6Q14129 220 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 FGD3Q5JSP0 725 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 DCAF12L2Q5VW00 463 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 USP43Q70EL4 1123 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 ST7LQ8TDW4 575 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 G6PC2Q9NQR9 355 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 ATPIF1Q9UII2 106 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 SAMD4AQ9UPU9 718 aaKnown RBP11.14□□□□□ -0.63
RTN3-207ENST00000536011 ADAM18Q9Y3Q7 739 aa11.14□□□□□ -0.63
RTN3-207ENST00000536011 CDC42EP2O14613 210 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 PRSS23O95084 383 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 NGFP01138 241 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 RHCEP18577 417 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 RGS6P49758 472 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 LSM6P62312 80 aaKnown RBP11.13□□□□□ -0.63
RTN3-207ENST00000536011 TNFAIP6P98066 277 aaPredicted RBP11.13□□□□□ -0.63
RTN3-207ENST00000536011 FHL1Q13642 323 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 KRT72Q14CN4 511 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 MESTQ5EB52 335 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 C8orf82Q6P1X6 216 aaPredicted RBP11.13□□□□□ -0.63
RTN3-207ENST00000536011 PGM2L1Q6PCE3 622 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 DNM1P34Q6PK57 102 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 C12orf54Q6X4T0 127 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 FAM122BQ7Z309 247 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 C1QL2Q7Z5L3 287 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 GLB1L2Q8IW92 636 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 SPICQ8N5J4 248 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 NANPQ8TBE9 248 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 SLC7A13Q8TCU3 470 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 FAM46AQ96IP4 442 aaKnown RBP11.13□□□□□ -0.63
RTN3-207ENST00000536011 Q96M85 177 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 GPX7Q96SL4 187 aaPredicted RBP11.13□□□□□ -0.63
RTN3-207ENST00000536011 SUCNR1Q9BXA5 334 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 MSL2Q9HCI7 577 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 EMC7Q9NPA0 242 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 SPAG4Q9NPE6 437 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 PLEK2Q9NYT0 353 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 PCDHB10Q9UN67 800 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 POLR1DQ9Y2S0 133 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 CACNG2Q9Y698 323 aa11.13□□□□□ -0.63
RTN3-207ENST00000536011 TRIM77I1YAP6 450 aa11.12□□□□□ -0.63
RTN3-207ENST00000536011 KHDRBS3O75525 346 aaKnown RBP11.12□□□□□ -0.63
RTN3-207ENST00000536011 FOXH1O75593 365 aa11.12□□□□□ -0.63
RTN3-207ENST00000536011 MDH1P40925 334 aaKnown RBP11.12□□□□□ -0.63
RTN3-207ENST00000536011 RPS6KA3P51812 740 aa11.12□□□□□ -0.63
RTN3-207ENST00000536011 SMIM11AP58511 58 aa11.12□□□□□ -0.63
RTN3-207ENST00000536011 ACTG1P63261 375 aa11.12□□□□□ -0.63
RTN3-207ENST00000536011 PSG7Q13046 419 aa11.12□□□□□ -0.63
RTN3-207ENST00000536011 CDK5R2Q13319 367 aa11.12□□□□□ -0.63
RTN3-207ENST00000536011 TBPL2Q6SJ96 375 aa11.12□□□□□ -0.63
RTN3-207ENST00000536011 VASH1Q7L8A9 365 aaPredicted RBP11.12□□□□□ -0.63
RTN3-207ENST00000536011 BPIFB2Q8N4F0 458 aa11.12□□□□□ -0.63
RTN3-207ENST00000536011 KLHL36Q8N4N3 616 aa11.12□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms