RNA–Protein interactions for RNA: ENST00000535958.1

TNFRSF1A-207, Transcript of TNF receptor superfamily member 1A, humanhuman

TSL 4

Gene TNFRSF1A, Length 568 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1A-207ENST00000535958 IGHV3OR16-10A0A075B7F0 116 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 IGKV1D-43A0A0B4J1Z2 117 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TRAV40A0A0B4J280 105 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TRAPPC2LH3BP13 241 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CLDN34H7C241 214 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 IFNL4K9M1U5 179 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ICMTO60725 284 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SHOX2O60902 331 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CRYBA1P05813 215 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 THRBP10828 461 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 IFI30P13284 250 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CTXN1P60606 82 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 GNB2P62879 340 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 GUCY1A3Q02108 690 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 PSG7Q13046 419 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CDK5R2Q13319 367 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LAPTM4AQ15012 233 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ZMYND11Q15326 602 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TMEM255AQ5JRV8 349 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 KLF17Q5JT82 389 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LEG1Q6P5S2 330 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LRRN1Q6UXK5 716 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SYT9Q86SS6 491 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LRRC28Q86X40 367 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ITLN1Q8WWA0 313 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ZDHHC16Q969W1 377 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 PLEKHA8Q96JA3 519 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ZNF48Q96MX3 618 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 OR2V2Q96R30 315 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ECSITQ9BQ95 431 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SSBP3Q9BWW4 388 aaPredicted RBP10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SLITRK2Q9H156 845 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 HIF3AQ9Y2N7 669 aa10.92□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LRRC30A6NM36 301 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CEACAM18A8MTB9 384 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 XKRYO14609 159 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 COX5BP10606 129 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TNFRSF1BP20333 461 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ST3GAL3Q11203 375 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 PIN1Q13526 163 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CYLC2Q14093 348 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SLC9A3R2Q15599 337 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SPRNQ5BIV9 151 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SLC27A4Q6P1M0 643 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 C1orf94Q6P1W5 598 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CCDC80Q76M96 950 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 NLRC3Q7RTR2 1065 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 IGFN1Q86VF2 1251 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ATG16L2Q8NAA4 619 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LIPHQ8WWY8 451 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 NMD3Q96D46 503 aaKnown RBP10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 BPIFA2Q96DR5 249 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 WACQ9BTA9 647 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TBCCD1Q9NVR7 557 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 KIF17Q9P2E2 1029 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 KLHL21Q9UJP4 597 aa10.91□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TRRAPQ9Y4A5 3859 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 A0A1B0GUS0 222 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 HTR3EA5X5Y0 456 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 F5H0A9 414 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SGCEO43556 437 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 PIP5K1CO60331 668 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 KNG1P01042 644 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 PPIAL4GP0DN37 164 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 IGHV4-38-2P0DP08 117 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 KITLGP21583 273 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 MDKP21741 143 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CPT2P23786 658 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 RPL4P36578 427 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 OR1E2P47887 323 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 SRP9P49458 86 aaKnown RBP10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 MMP16P51512 607 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 LRRC23Q53EV4 343 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TTMPQ5BVD1 217 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 ERICH5Q6P6B1 374 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 C16orf87Q6PH81 154 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 C1orf87Q8N0U7 546 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 OR5AS1Q8N127 324 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CLDN22Q8N7P3 220 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 OR8B3Q8NGG8 313 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TSPEARQ8WU66 669 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 TMIGD2Q96BF3 282 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 CMBLQ96DG6 245 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 C1orf147Q96MC9 270 aaPredicted RBP10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 OR8B2Q96RD0 313 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 EMC7Q9NPA0 242 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 POLE4Q9NR33 117 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 MIOXQ9UGB7 285 aa10.9□□□□□ -0.66
TNFRSF1A-207ENST00000535958 IGHV2-70DA0A0C4DH43 119 aa10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 TMEM178BH3BS89 294 aa10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 TSPAN19P0C672 248 aa10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 IRF2P14316 349 aa10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 OMGP23515 440 aa10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 PAX8Q06710 450 aa10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 HNRNPA0Q13151 305 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 ENDOGQ14249 297 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 ANKDD1AQ495B1 522 aa10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 ZNF362Q5T0B9 420 aaPredicted RBP10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 AGBL2Q5U5Z8 902 aa10.89□□□□□ -0.67
TNFRSF1A-207ENST00000535958 BRICD5Q6PL45 260 aa10.89□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms