RNA–Protein interactions for RNA: ENST00000535313.1

CLSTN3-204, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 787 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-204ENST00000535313 FGD3Q5JSP0 725 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 FAHD2BQ6P2I3 314 aaPredicted RBP13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 ZER1Q7Z7L7 766 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 TEX29Q8N6K0 151 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 CCL17Q92583 94 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 FAHD2AQ96GK7 314 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 DIRC2Q96SL1 478 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 OCEL1Q9H607 264 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 SPAG4Q9NPE6 437 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 KRCC1Q9NPI7 259 aaPredicted RBP13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 ZDHHC8Q9ULC8 765 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 SAMD4AQ9UPU9 718 aaKnown RBP13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 WIPI2Q9Y4P8 454 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 CACNG2Q9Y698 323 aa13.76□□□□□ -0.21
CLSTN3-204ENST00000535313 TEX13CA0A0J9YWL9 993 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 ZSCAN5BA6NJL1 495 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 SGCEO43556 437 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 TIMM8AO60220 97 aaPredicted RBP13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 DOK2O60496 412 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 MPZL1O95297 269 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 SCG5P05408 212 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 ZNF26P17031 533 aaPredicted RBP13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 RHCEP18577 417 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 GSTM3P21266 225 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 HTR5AP47898 357 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 KRR1Q13601 381 aaKnown RBP13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 KRT72Q14CN4 511 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 MTX3Q5HYI7 312 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 TMEM255AQ5JRV8 349 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 GPR139Q6DWJ6 353 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 GLYATQ6IB77 296 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 FAM122BQ7Z309 247 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 PEG10Q86TG7 708 aaKnown RBP13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 NPEPL1Q8NDH3 523 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 ELAC2Q9BQ52 826 aaKnown RBP13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 RERGLQ9H628 205 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 TBCCD1Q9NVR7 557 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 ADA2Q9NZK5 511 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 NDUFAF4Q9P032 175 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 EGFL7Q9UHF1 273 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 AURKCQ9UQB9 309 aa13.75□□□□□ -0.21
CLSTN3-204ENST00000535313 SLC16A7O60669 478 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 PTP4A3O75365 173 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 KHDRBS3O75525 346 aaKnown RBP13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 PNPP00491 289 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 ADH4P08319 380 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 CTLA4P16410 223 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 ITGA2P17301 1181 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 TUBG1P23258 451 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 PRDX6P30041 224 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 SDHAP31040 664 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 AQP6Q13520 282 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 TSEN54Q7Z6J9 526 aaKnown RBP13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 GLB1L2Q8IW92 636 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 RASD2Q96D21 266 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 RSRC1Q96IZ7 334 aaKnown RBP13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 GPX7Q96SL4 187 aaPredicted RBP13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 GAL3ST1Q99999 423 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 MYLK2Q9H1R3 596 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 SYT4Q9H2B2 425 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 MSL2Q9HCI7 577 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 NRIP3Q9NQ35 241 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 TUBG2Q9NRH3 451 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 DCAF13Q9NV06 445 aaKnown RBP13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 PLEK2Q9NYT0 353 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 SIGLEC7Q9Y286 467 aa13.74□□□□□ -0.21
CLSTN3-204ENST00000535313 A0A0A6YYJ9 748 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 A0A0G2JMP0 313 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 A0A0X1KG70 313 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 ISPDA4D126 451 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 PLPP2O43688 288 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 UBOX5O94941 541 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 IGHV2-5P01817 119 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 CD55P08174 381 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 TNFSF4P23510 183 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 OMPP47874 163 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 LIMS1P48059 325 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 RPS6KA3P51812 740 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 TNFAIP6P98066 277 aaPredicted RBP13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 PSG7Q13046 419 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 DPY19L2P2Q6ZN68 376 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 VASH1Q7L8A9 365 aaPredicted RBP13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 ADCK1Q86TW2 530 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 OR4M2Q8NGB6 313 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 OR52J3Q8NH60 311 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 COG8Q96MW5 612 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 FAM107BQ9H098 131 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 VSX1Q9NZR4 365 aaPredicted RBP13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 IL20RAQ9UHF4 553 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 KLHL21Q9UJP4 597 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 IER3IP1Q9Y5U9 82 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 ANK2Q01484 3957 aa13.73□□□□□ -0.21
CLSTN3-204ENST00000535313 TRBV4-1A0A0J9YWV2 114 aa13.72□□□□□ -0.21
CLSTN3-204ENST00000535313 UNC119BA6NIH7 251 aa13.72□□□□□ -0.21
CLSTN3-204ENST00000535313 HAX1O00165 279 aa13.72□□□□□ -0.21
CLSTN3-204ENST00000535313 SOCS2O14508 198 aa13.72□□□□□ -0.21
CLSTN3-204ENST00000535313 DEAF1O75398 565 aaPredicted RBP13.72□□□□□ -0.21
CLSTN3-204ENST00000535313 SMIM11AP58511 58 aa13.72□□□□□ -0.21
CLSTN3-204ENST00000535313 LSM6P62312 80 aaKnown RBP13.72□□□□□ -0.21
CLSTN3-204ENST00000535313 THSD4Q6ZMP0 1018 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.4 ms