RNA–Protein interactions for RNA: ENST00000534551.2

VPS11-205, Transcript of VPS11, CORVET/HOPS core subunit, humanhuman

TSL 3

Gene VPS11, Length 585 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11-205ENST00000534551 KRTAP1-3Q8IUG1 177 aa12.1□□□□□ -0.47
VPS11-205ENST00000534551 DEPDC4Q8N2C3 294 aa12.1□□□□□ -0.47
VPS11-205ENST00000534551 OR2T4Q8NH00 348 aa12.1□□□□□ -0.47
VPS11-205ENST00000534551 DNAJC9Q8WXX5 260 aa12.1□□□□□ -0.47
VPS11-205ENST00000534551 NINJ1Q92982 152 aa12.1□□□□□ -0.47
VPS11-205ENST00000534551 OR51V1Q9H2C8 321 aa12.1□□□□□ -0.47
VPS11-205ENST00000534551 CDH20Q9HBT6 801 aa12.1□□□□□ -0.47
VPS11-205ENST00000534551 MOV10Q9HCE1 1003 aaKnown RBP12.1□□□□□ -0.47
VPS11-205ENST00000534551 TVP23BQ9NYZ1 205 aa12.1□□□□□ -0.47
VPS11-205ENST00000534551 ZNF469Q96JG9 3925 aaPredicted RBP12.09□□□□□ -0.47
VPS11-205ENST00000534551 IQCMA0A1B0GVH7 501 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 C5orf49A4QMS7 147 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 ZAR1LA6NP61 321 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 PRKYO43930 277 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 ALPLP05186 524 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 APLNRP35414 380 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 GGT2P36268 569 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 GLO1Q04760 184 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 PLP2Q04941 152 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 SCRN3Q0VDG4 424 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 RCN1Q15293 331 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 KCNMB1Q16558 191 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 TBC1D28Q2M2D7 210 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 TMEM255AQ5JRV8 349 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 SPATA46Q5T0L3 261 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 SLC18B1Q6NT16 456 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 TMEM154Q6P9G4 183 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 DTX2Q86UW9 622 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 ZNF101Q8IZC7 436 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 FBXL14Q8N1E6 418 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 MUC15Q8N387 334 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 CBR4Q8N4T8 237 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 NUP37Q8NFH4 326 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 TMEM171Q8WVE6 324 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 STMN2Q93045 179 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 POM121L2Q96KW2 1035 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 CACNG6Q9BXT2 260 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 GABARAPL3Q9BY60 117 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 POFUT1Q9H488 388 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 PLEK2Q9NYT0 353 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 MYEF2Q9P2K5 600 aaKnown RBP12.09□□□□□ -0.47
VPS11-205ENST00000534551 GDF2Q9UK05 429 aaPredicted RBP12.09□□□□□ -0.47
VPS11-205ENST00000534551 CREBBPQ92793 2442 aa12.09□□□□□ -0.47
VPS11-205ENST00000534551 SGCEO43556 437 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 SYNGR3O43761 229 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 SMPD2O60906 423 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 SPARCP09486 303 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 OR4A8P0C604 315 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 SLC2A5P22732 501 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 NR4A1P22736 598 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 ANOS1P23352 680 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 PAX7P23759 505 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 PTH2RP49190 550 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 LSM6P62312 80 aaKnown RBP12.08□□□□□ -0.48
VPS11-205ENST00000534551 ADAM8P78325 824 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 GALK2Q01415 458 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 SNAPC1Q16533 368 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 ZIK1Q3SY52 487 aaPredicted RBP12.08□□□□□ -0.48
VPS11-205ENST00000534551 KLHL12Q53G59 568 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 SLX4IPQ5VYV7 408 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 C12orf73Q69YU5 71 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 LRP11Q86VZ4 500 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 CPOQ8IVL8 374 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 OR10H5Q8NGA6 315 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 OR4F15Q8NGB8 312 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 OR10S1Q8NGN2 331 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 PTP4A1Q93096 173 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 MBD6Q96DN6 1003 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 ZMYND19Q96E35 227 aaPredicted RBP12.08□□□□□ -0.48
VPS11-205ENST00000534551 MAP6Q96JE9 813 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 SLC29A1Q99808 456 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 RBM4BQ9BQ04 359 aaKnown RBP12.08□□□□□ -0.48
VPS11-205ENST00000534551 SYT3Q9BQG1 590 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 PNRC2Q9NPJ4 139 aaKnown RBP12.08□□□□□ -0.48
VPS11-205ENST00000534551 FBXL3Q9UKT7 428 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 TIMM10BQ9Y5J6 103 aa12.08□□□□□ -0.48
VPS11-205ENST00000534551 CCDC182A6NF36 153 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 OR6C6A6NF89 314 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 PRR23D1E9PI22 279 aaPredicted RBP12.07□□□□□ -0.48
VPS11-205ENST00000534551 SELENOFO60613 162 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 SNAP29O95721 258 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 PRR23D2P0DMB1 279 aaPredicted RBP12.07□□□□□ -0.48
VPS11-205ENST00000534551 NAA10P41227 235 aaPredicted RBP12.07□□□□□ -0.48
VPS11-205ENST00000534551 GDI2P50395 445 aaKnown RBP12.07□□□□□ -0.48
VPS11-205ENST00000534551 PCBD1P61457 104 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 ESRRGP62508 458 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 RAB35Q15286 201 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 TESK1Q15569 626 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 MST1LQ2TV78 715 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 AGAP6Q5VW22 663 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 ZNF544Q6NX49 715 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 SPATC1Q76KD6 591 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 CXXC5Q7LFL8 322 aaKnown RBP12.07□□□□□ -0.48
VPS11-205ENST00000534551 ERI1Q8IV48 349 aaKnown RBP12.07□□□□□ -0.48
VPS11-205ENST00000534551 GTF3AQ92664 365 aaKnown RBP12.07□□□□□ -0.48
VPS11-205ENST00000534551 PLEKHA8Q96JA3 519 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 IL4I1Q96RQ9 567 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 MBOAT4Q96T53 435 aa12.07□□□□□ -0.48
VPS11-205ENST00000534551 MRPL37Q9BZE1 423 aaKnown RBP12.07□□□□□ -0.48
VPS11-205ENST00000534551 GRIP2Q9C0E4 1043 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms