RNA–Protein interactions for RNA: ENST00000534356.1

CASP4-213, Transcript of caspase 4, humanhuman

TSL 1 (best)

Gene CASP4, Length 771 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASP4-213ENST00000534356 CCR1P32246 355 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 GNA12Q03113 381 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 TLE4Q04727 773 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 KLRB1Q12918 225 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 EIF3IQ13347 325 aaKnown RBP4.25□□□□□ -1.73
CASP4-213ENST00000534356 PNOCQ13519 176 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 ELOCQ15369 112 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 PTPN20Q4JDL3 420 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 RIPPLY2Q5TAB7 128 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 UNQ9370/PRO34162Q6UXP9 181 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 GKN2Q86XP6 184 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 NRMQ8IXM6 262 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 MTURNQ8N3F0 131 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 ZNF557Q8N988 423 aaPredicted RBP4.25□□□□□ -1.73
CASP4-213ENST00000534356 DCAF4L2Q8NA75 395 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 OR52I1Q8NGK6 324 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 SPRYD4Q8WW59 207 aaPredicted RBP4.25□□□□□ -1.73
CASP4-213ENST00000534356 RPL3LQ92901 407 aaKnown RBP4.25□□□□□ -1.73
CASP4-213ENST00000534356 LINC00167Q96N53 147 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 NPY6RQ99463 290 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 CRACR2AQ9BSW2 395 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 ANP32EQ9BTT0 268 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 HES7Q9BYE0 225 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 AIPL1Q9NZN9 384 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 LAMP5Q9UJQ1 280 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 DCHS2Q6V1P9 2916 aa4.25□□□□□ -1.73
CASP4-213ENST00000534356 TACC2O95359 2948 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 IGHV1OR21-1A0A087WYE8 117 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 G3V4G9 280 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 GOLGA8SH3BPF8 625 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 TMX2-CTNND1H3BSU7 103 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 ABCD4O14678 606 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 CETN3O15182 167 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 UGT2B17O75795 530 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 SUPT7LO94864 414 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 LALBAP00709 142 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 PTMAP06454 111 aaKnown RBP4.24□□□□□ -1.73
CASP4-213ENST00000534356 THRAP10827 490 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 EPB41P11171 864 aaKnown RBP4.24□□□□□ -1.73
CASP4-213ENST00000534356 TCN2P20062 427 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 SULT1E1P49888 294 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 CAPRIN1Q14444 709 aaKnown RBP4.24□□□□□ -1.73
CASP4-213ENST00000534356 ZNF630Q2M218 657 aaPredicted RBP4.24□□□□□ -1.73
CASP4-213ENST00000534356 GGTA1PQ4G0N0 100 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 CXorf40AQ8TE69 158 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 STARD8Q92502 1023 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 ZNF396Q96N95 335 aaPredicted RBP4.24□□□□□ -1.73
CASP4-213ENST00000534356 ARHGDIGQ99819 225 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 NAT10Q9H0A0 1025 aaKnown RBP4.24□□□□□ -1.73
CASP4-213ENST00000534356 MAGT1Q9H0U3 335 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 NXF5Q9H1B4 397 aaKnown RBP4.24□□□□□ -1.73
CASP4-213ENST00000534356 ZNF385DQ9H6B1 395 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 SLC35D1Q9NTN3 355 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 NEU3Q9UQ49 428 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 DOCK10Q96BY6 2186 aa4.24□□□□□ -1.73
CASP4-213ENST00000534356 ACANP16112 2415 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 SPG11Q96JI7 2443 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 A0A1B0GWJ7 208 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 USP27XA6NNY8 438 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 PRKYO43930 277 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 DRD5P21918 477 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 CMA1P23946 247 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 SYKP43405 635 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 PRKXP51817 358 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 ZNF133P52736 654 aaPredicted RBP4.23□□□□□ -1.73
CASP4-213ENST00000534356 GFERP55789 205 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 CHRNB3Q05901 458 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 ATL3Q6DD88 541 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 RWDD4Q6NW29 188 aaKnown RBP4.23□□□□□ -1.73
CASP4-213ENST00000534356 FAM71F2Q6NXP2 309 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 IGFL2Q6UWQ7 119 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 CERS6Q6ZMG9 384 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 Q6ZVH6 145 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 ARCQ7LC44 396 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 SETD3Q86TU7 594 aaPredicted RBP4.23□□□□□ -1.73
CASP4-213ENST00000534356 TPRA1Q86W33 373 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 SVOPLQ8N434 492 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 OR56A4Q8NGH8 313 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 JOSD2Q8TAC2 188 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 NT5C3BQ969T7 300 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 KLHDC3Q9BQ90 382 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 EBF4Q9BQW3 602 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 RHBGQ9H310 441 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 ZDHHC11Q9H8X9 412 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 SIGLEC8Q9NYZ4 499 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 MAD1L1Q9Y6D9 718 aa4.23□□□□□ -1.73
CASP4-213ENST00000534356 ARGFXA6NJG6 315 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 VSTM2BA6NLU5 285 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 KDELR3O43731 214 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 STX10O60499 249 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 H2BFMP0C1H6 154 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 SLC2A3P11169 496 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 CCNB1P14635 433 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 DESP17661 470 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 PAX7P23759 505 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 CD82P27701 267 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 CD1BP29016 333 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 CA5AP35218 305 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 APOC4P55056 127 aa4.22□□□□□ -1.73
CASP4-213ENST00000534356 RHOAP61586 193 aa4.22□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms