RNA–Protein interactions for RNA: ENST00000533079.5

CAPN1-223, Transcript of calpain 1, human

TSL 3

Gene CAPN1, Length 878 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CAPN1-223	ENST00000533079	PCGF2	P35227	344 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	CRAT	P43155	626 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	RAG2	P55895	527 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	RPL15	P61313	204 aa	Known RBP	10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	PLP2	Q04941	152 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	PDCD1	Q15116	288 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	RPS26P11	Q5JNZ5	115 aa	Predicted RBP	10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	OLFML2A	Q68BL7	652 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	ULK3	Q6PHR2	472 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	IZUMO2	Q6UXV1	221 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	NHLRC1	Q6VVB1	395 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	OR1J1	Q8NGS3	322 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	OR6X1	Q8NH79	312 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	FGFBP3	Q8TAT2	258 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	TMEM54	Q969K7	222 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	FAM162A	Q96A26	154 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	SLC47A1	Q96FL8	570 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	TMEM19	Q96HH6	336 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	SLC19A3	Q9BZV2	496 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	OR51B6	Q9H340	312 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	RNF121	Q9H920	327 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	PATZ1	Q9HBE1	687 aa	Known RBP	10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	MMP26	Q9NRE1	261 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	SELENON	Q9NZV5	590 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	OR5V1	Q9UGF6	321 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	RAB26	Q9ULW5	256 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079	AURKC	Q9UQB9	309 aa		10.49	□□□□□ -0.73
CAPN1-223	ENST00000533079		A0A1B0GWA3	101 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	TRAPPC2L	H3BP13	241 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	DENR	O43583	198 aa	Known RBP	10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	TIPRL	O75663	272 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	MT-ATP6	P00846	226 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	NGF	P01138	241 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	IFNA14	P01570	189 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	BGLAP	P02818	100 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	CRYBA1	P05813	215 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	PATE4	P0C8F1	98 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	CBL	P22681	906 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	PRKAR1B	P31321	381 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	APLNR	P35414	380 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	MAGEA2	P43356	314 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	SLC6A9	P48067	706 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	GLO1	Q04760	184 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	ZNF718	Q3SXZ3	478 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	ESCO2	Q56NI9	601 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	GCNT6	Q5T4J0	391 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	MBNL2	Q5VZF2	373 aa	Known RBP	10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	LPCAT4	Q643R3	524 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	CBLL1	Q75N03	491 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	SLC16A14	Q7RTX9	510 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	ICA1L	Q8NDH6	482 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	OR52E2	Q8NGJ4	325 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	BBS10	Q8TAM1	723 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	GTF3A	Q92664	365 aa	Known RBP	10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	ZNF566	Q969W8	418 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	EME1	Q96AY2	570 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	TXNDC15	Q96J42	360 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	NR1H4	Q96RI1	486 aa	Predicted RBP	10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	C9orf16	Q9BUW7	83 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	OSBPL10	Q9BXB5	764 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	PRDM13	Q9H4Q3	707 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	BCL2L10	Q9HD36	194 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	GLTP	Q9NZD2	209 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	DNAJB9	Q9UBS3	223 aa		10.48	□□□□□ -0.73
CAPN1-223	ENST00000533079	SRRM5	B3KS81	715 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079		F5H0A9	414 aa	Predicted RBP	10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	PLPP3	O14495	311 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	HOXA3	O43365	443 aa	Predicted RBP	10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	SPRY3	O43610	288 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	SERPINA1	P01009	418 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	SEMG1	P04279	462 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	CCL2	P13500	99 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	OMG	P23515	440 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	AHCY	P23526	432 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	BID	P55957	195 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	BPIFB3	P59826	476 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	HOXC5	Q00444	222 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	PAX8	Q06710	450 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	BTNL3	Q6UXE8	466 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	LRRN1	Q6UXK5	716 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	ZBTB49	Q6ZSB9	765 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	RHOU	Q7L0Q8	258 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	TMEM86B	Q8N661	226 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	IPCEF1	Q8WWN9	437 aa	Predicted RBP	10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	UPRT	Q96BW1	309 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	SLC25A44	Q96H78	314 aa	Predicted RBP	10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	ZNF570	Q96NI8	536 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	SH3GL3	Q99963	347 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	RBM4B	Q9BQ04	359 aa	Known RBP	10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	TMEM43	Q9BTV4	400 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079		Q9H521	79 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	IL1RAP	Q9NPH3	570 aa		10.47	□□□□□ -0.73
CAPN1-223	ENST00000533079	CLPSL1	A2RUU4	121 aa		10.46	□□□□□ -0.73
CAPN1-223	ENST00000533079	FAM181B	A6NEQ2	426 aa		10.46	□□□□□ -0.73
CAPN1-223	ENST00000533079	ZSCAN5B	A6NJL1	495 aa		10.46	□□□□□ -0.73
CAPN1-223	ENST00000533079	DHH	O43323	396 aa		10.46	□□□□□ -0.73
CAPN1-223	ENST00000533079	ICMT	O60725	284 aa		10.46	□□□□□ -0.73
CAPN1-223	ENST00000533079	IGHV4-38-2	P0DP08	117 aa		10.46	□□□□□ -0.73
CAPN1-223	ENST00000533079	ETS2	P15036	469 aa		10.46	□□□□□ -0.73
CAPN1-223	ENST00000533079	HTR2A	P28223	471 aa		10.46	□□□□□ -0.73

Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms