RNA–Protein interactions for RNA: ENST00000532024.1

PPFIA1-220, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 3

Gene PPFIA1, Length 563 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-220ENST00000532024 MEDAGQ5VYS4 303 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 HIST2H2BCQ6DN03 193 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 ADAM5Q6NVV9 412 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 UGT2A3Q6UWM9 527 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 SHFQ7M4L6 423 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 ERI1Q8IV48 349 aaKnown RBP10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 ZNF295-AS1Q8N0V1 137 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 DHRSXQ8N5I4 330 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 IPCEF1Q8WWN9 437 aaPredicted RBP10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 PTP4A1Q93096 173 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 Q96MT0 163 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 HCAR1Q9BXC0 346 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 NOX3Q9HBY0 568 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 FAIMQ9NVQ4 179 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 NBPF19A0A087WUL8 3843 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 CRYBG3Q68DQ2 2970 aa10.29□□□□□ -0.76
PPFIA1-220ENST00000532024 M0R129 80 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 SIAH2O43255 324 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 GPANK1O95872 356 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 STOMP27105 288 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 HTR5AP47898 357 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 HSPA13P48723 471 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 SNRPGP62308 76 aaKnown RBP10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 TMED1Q13445 227 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 IL18R1Q13478 541 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 TEX30Q5JUR7 227 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 MEPCEQ7L2J0 689 aaKnown RBP10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 CDC20BQ86Y33 519 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 ZNF454Q8N9F8 522 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 BBS1Q8NFJ9 593 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 OR6N2Q8NGY6 317 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 AKR7LQ8NHP1 331 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 FGFBP3Q8TAT2 258 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 FBXW5Q969U6 566 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 ZMYND19Q96E35 227 aaPredicted RBP10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 MS4A3Q96HJ5 214 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 CNN2Q99439 309 aaKnown RBP10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 TEAD3Q99594 435 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 TMEM204Q9BSN7 226 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 MRPL22Q9NWU5 206 aaKnown RBP10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 CLN6Q9NWW5 311 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 EIF3KQ9UBQ5 218 aaKnown RBP10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 WARS2Q9UGM6 360 aaKnown RBP10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 CYB5R1Q9UHQ9 305 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 LHFPL6Q9Y693 200 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 TMEM14AQ9Y6G1 99 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 ATP23Q9Y6H3 246 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 CELSR2Q9HCU4 2923 aa10.28□□□□□ -0.76
PPFIA1-220ENST00000532024 IGHV2OR16-5A0A0B4J2B6 119 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 C5orf49A4QMS7 147 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 OR6C6A6NF89 314 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 ATP6V1G2-DDX39BF2Z307 99 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 H0YAE9 185 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 ZNF593O00488 134 aaPredicted RBP10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 SCG5P05408 212 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 CELA3BP08861 270 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 CCNOP22674 350 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 SLC2A5P22732 501 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 APEX1P27695 318 aaKnown RBP10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 ATP6V1E1P36543 226 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 CAPGP40121 348 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 SLC15A1P46059 708 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 NUDT6P53370 316 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 EFNB1P98172 346 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 TAF13Q15543 124 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 ZNF672Q499Z4 452 aaPredicted RBP10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 ELFN2Q5R3F8 820 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 SLC25A30Q5SVS4 291 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 LINC01590Q5TEZ4 76 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 AADACL4Q5VUY2 407 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 SLC18B1Q6NT16 456 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 ZNF774Q6NX45 483 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 C20orf204Q6ZNR8 217 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 VASH1Q7L8A9 365 aaPredicted RBP10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 LINC00346Q8IVM7 164 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 C1orf174Q8IYL3 243 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 ZNF511Q8NB15 262 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 KBTBD8Q8NFY9 601 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 OR1F12Q8NHA8 337 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 HS3ST6Q96QI5 342 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 MNTQ99583 582 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 COQ7Q99807 217 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 ADI1Q9BV57 179 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 YIPF3Q9GZM5 350 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 WNT5BQ9H1J7 359 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 MARCH7Q9H992 704 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 UBTD1Q9HAC8 227 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 ELOVL3Q9HB03 270 aa10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 GDF2Q9UK05 429 aaPredicted RBP10.27□□□□□ -0.77
PPFIA1-220ENST00000532024 TACC2O95359 2948 aa10.26□□□□□ -0.77
PPFIA1-220ENST00000532024 DCHS2Q6V1P9 2916 aa10.26□□□□□ -0.77
PPFIA1-220ENST00000532024 ZNF878C9JN71 531 aa10.26□□□□□ -0.77
PPFIA1-220ENST00000532024 HS3ST1O14792 307 aa10.26□□□□□ -0.77
PPFIA1-220ENST00000532024 RER1O15258 196 aa10.26□□□□□ -0.77
PPFIA1-220ENST00000532024 LOXP28300 417 aaPredicted RBP10.26□□□□□ -0.77
PPFIA1-220ENST00000532024 PCSK6P29122 969 aa10.26□□□□□ -0.77
PPFIA1-220ENST00000532024 HTR1FP30939 366 aa10.26□□□□□ -0.77
PPFIA1-220ENST00000532024 NAA10P41227 235 aaPredicted RBP10.26□□□□□ -0.77
PPFIA1-220ENST00000532024 RAD52P43351 418 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms