RNA–Protein interactions for RNA: ENST00000531158.1

CHMP4A-205, Transcript of charged multivesicular body protein 4A, humanhuman

TSL 4

Gene CHMP4A, Length 563 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP4A-205ENST00000531158 VTCN1Q7Z7D3 282 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 C20orf196Q8IYI0 205 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 GPR137CQ8N3F9 429 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 PAQR4Q8N4S7 273 aaPredicted RBP7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 ZNF418Q8TF45 676 aaPredicted RBP7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 GEMIN6Q8WXD5 167 aaKnown RBP7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 GTF3AQ92664 365 aaKnown RBP7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 RDH5Q92781 318 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 FAHD2AQ96GK7 314 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 SLC41A3Q96GZ6 507 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 TMEM19Q96HH6 336 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 TXNDC15Q96J42 360 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 OXGR1Q96P68 337 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 SIGLEC11Q96RL6 698 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 RIBC2Q9H4K1 309 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 PAK1IP1Q9NWT1 392 aaPredicted RBP7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 MED29Q9NX70 200 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 PDP1Q9P0J1 537 aaPredicted RBP7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 POFUT2Q9Y2G5 429 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 GRIP1Q9Y3R0 1128 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 U3KQV3 271 aa7.85□□□□□ -1.15
CHMP4A-205ENST00000531158 TRAV20A0A0B4J274 112 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 LOC102725191A0A1B0GVB3 256 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 LRRN3E7EW58 273 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 PPIHO43447 177 aaKnown RBP7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 RGS10O43665 173 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 PLPP2O43688 288 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 MITFO75030 526 aaPredicted RBP7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 CLPXO76031 633 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 PATE4P0C8F1 98 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 ANXA8P13928 327 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 ZNF12P17014 697 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 PRKACGP22612 351 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 CBLP22681 906 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 GIPRP48546 466 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 ENTPD1P49961 510 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 CRYBA2P53672 197 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 PCBP3P57721 371 aaKnown RBP7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 ERVS71-1P61550 626 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 COPZ1P61923 177 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 MRPS11P82912 194 aaKnown RBP7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 SCARB2Q14108 478 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 MFSD13AQ14CX5 517 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 TBCEQ15813 527 aaPredicted RBP7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 ALKBH6Q3KRA9 238 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 AVPI1Q5T686 147 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 FAM69AQ5T7M9 428 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 SYT6Q5T7P8 510 aaPredicted RBP7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 WDR88Q6ZMY6 472 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 C1QL2Q7Z5L3 287 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 PARP8Q8N3A8 854 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 LRRC17Q8N6Y2 441 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 ATG16L2Q8NAA4 619 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 DRAXINQ8NBI3 349 aaPredicted RBP7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 IL17RDQ8NFM7 739 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 OR4C15Q8NGM1 316 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 OR51F2Q8NH61 342 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 RNF217Q8TC41 542 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 TRUB1Q8WWH5 349 aaKnown RBP7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 RORBQ92753 470 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 MAL2Q969L2 176 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 HRASLS5Q96KN8 279 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 C1orf147Q96MC9 270 aaPredicted RBP7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 MOGAT1Q96PD6 335 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 WFDC6Q9BQY6 131 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 FUNDC2Q9BWH2 189 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 C1QTNF5Q9BXJ0 243 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 NAA50Q9GZZ1 169 aaKnown RBP7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 MS4A5Q9H3V2 200 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 ZNF665Q9H7R5 613 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 PLCXD1Q9NUJ7 323 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 P2RX2Q9UBL9 471 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 OPN4Q9UHM6 478 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 LYVE1Q9Y5Y7 322 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 CACNG2Q9Y698 323 aa7.84□□□□□ -1.15
CHMP4A-205ENST00000531158 IGLV3-9A0A075B6K5 115 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 A0A087WUJ7 227 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 A0A1B0GWA3 101 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 TRIM77I1YAP6 450 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 TPST2O60704 377 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 CDC14BO60729 498 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 BGLAPP02818 100 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 CD79AP11912 226 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 RRM2P31350 389 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 GGT2P36268 569 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 CRATP43155 626 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 CRISP3P54108 245 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 TMEM33P57088 247 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 DSTNP60981 165 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 RAB1AP62820 205 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 UBA52P62987 128 aaKnown RBP7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 CDK6Q00534 326 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 EMX1Q04741 257 aaPredicted RBP7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 UBE2UQ5VVX9 321 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 TREML4Q6UXN2 200 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 ZNF813Q6ZN06 617 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 ARMC8Q8IUR7 673 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 SKA3Q8IX90 412 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 CCDC36Q8IYA8 594 aa7.83□□□□□ -1.16
CHMP4A-205ENST00000531158 ADPRHL1Q8NDY3 354 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms