RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 PBDC1Q9BVG4 233 aa5□□□□□ -1.61
CD44-231ENST00000531110 DPAGT1Q9H3H5 408 aa5□□□□□ -1.61
CD44-231ENST00000531110 TMEM38AQ9H6F2 299 aa5□□□□□ -1.61
CD44-231ENST00000531110 HRASLSQ9HDD0 168 aa5□□□□□ -1.61
CD44-231ENST00000531110 ISYNA1Q9NPH2 558 aa5□□□□□ -1.61
CD44-231ENST00000531110 BEX4Q9NWD9 120 aaPredicted RBP5□□□□□ -1.61
CD44-231ENST00000531110 NLKQ9UBE8 527 aa5□□□□□ -1.61
CD44-231ENST00000531110 SIX4Q9UIU6 781 aa5□□□□□ -1.61
CD44-231ENST00000531110 RHBDD3Q9Y3P4 386 aa5□□□□□ -1.61
CD44-231ENST00000531110 FLVCR1Q9Y5Y0 555 aa5□□□□□ -1.61
CD44-231ENST00000531110 DEPDC5O75140 1603 aa5□□□□□ -1.61
CD44-231ENST00000531110 SCN9AQ15858 1988 aa5□□□□□ -1.61
CD44-231ENST00000531110 LTN1O94822 1766 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 ANKRD31Q8N7Z5 1873 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 KIR2DL5BA0A0G2JN68 375 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 KIR2DL5BA0A0G2JPC4 375 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 A0A1W2PNV4 684 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 RNF212BA8MTL3 300 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 F5H6K3 240 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 MAGEB4O15481 346 aaPredicted RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 LYRM1O43325 122 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 PLRG1O43660 514 aaKnown RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 PRKAB2O43741 272 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 KLRC4O43908 158 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 KIAA0513O60268 411 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 SLC19A2O60779 497 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 OR2A4O95047 310 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 SIX3O95343 332 aaPredicted RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 CLDN7O95471 211 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 AIFM1O95831 613 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 TSPAN13O95857 204 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 CFDP00746 253 aaPredicted RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 MGMTP16455 207 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 RAB5AP20339 215 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 GCH1P30793 250 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 HOXD3P31249 432 aaPredicted RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 ICAM3P32942 547 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 AKR1C3P42330 323 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 RGS4P49798 205 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 MMP15P51511 669 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 NOVA1P51513 510 aaKnown RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 CCR8P51685 355 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 ARPP19P56211 112 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 OR2B8PP59922 312 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 TGM3Q08188 693 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 RBBP4Q09028 425 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 MAMLD1Q13495 774 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 TPBGQ13641 420 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 KIAA0141Q14154 515 aaPredicted RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 NSDHLQ15738 373 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 TAZQ16635 292 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 CYP51A1Q16850 503 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 PGGHGQ32M88 737 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 SCGB2B2Q4G0G5 96 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 ZNF658BQ4V348 819 aaPredicted RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 SPIN4Q56A73 249 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 REEP3Q6NUK4 255 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 Q6ZPB1 254 aaPredicted RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 KCTD9Q7L273 389 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 NUFIP2Q7Z417 695 aaKnown RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 C6orf120Q7Z4R8 191 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 GLCCI1Q86VQ1 547 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 CALHM1Q8IU99 346 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 LAX1Q8IWV1 398 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 C1orf87Q8N0U7 546 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 KIR2DL5AQ8N109 375 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 WDTC1Q8N5D0 677 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 FAM71CQ8NEG0 241 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 OR51G2Q8NGK0 314 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 OR4A15Q8NGL6 344 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 OR1K1Q8NGR3 316 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 SUSD6Q92537 303 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 RPUSD4Q96CM3 377 aaKnown RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 ZBED6CLQ96FA7 236 aaPredicted RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 MS4A4EQ96PG1 132 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 OR2A7Q96R45 310 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 OR8B4Q96RC9 309 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 PAFAH2Q99487 392 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 GPA33Q99795 319 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 SEMA3CQ99985 751 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 SLC5A7Q9GZV3 580 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 MAGT1Q9H0U3 335 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 ABCG5Q9H222 651 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 OR51E2Q9H255 320 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 ACTL8Q9H568 366 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 MEAF6Q9HAF1 191 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 DNAJC4Q9NNZ3 241 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 NGBQ9NPG2 151 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 TMEM161AQ9NX61 479 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 VPS29Q9UBQ0 182 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 PLEKHB1Q9UF11 243 aaPredicted RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 IKZF2Q9UKS7 526 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 PADI3Q9ULW8 664 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 RREB1Q92766 1687 aa4.99□□□□□ -1.61
CD44-231ENST00000531110 FAM208AQ9UK61 1670 aaKnown RBP4.99□□□□□ -1.61
CD44-231ENST00000531110 A0A087WZY1 265 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 IGHV2-70DA0A0C4DH43 119 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 A0A0D9SG52 128 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 A0A1B0GTI1 187 aa4.98□□□□□ -1.61
CD44-231ENST00000531110 A0A1W2PPM1 405 aa4.98□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms