RNA–Protein interactions for RNA: ENST00000531032.5

VPS28-214, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 1 (best)

Gene VPS28, Length 573 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-214ENST00000531032 ZFP36P26651 326 aaKnown RBP9.59□□□□□ -0.87
VPS28-214ENST00000531032 GUCA1AP43080 201 aaPredicted RBP9.59□□□□□ -0.87
VPS28-214ENST00000531032 NUDT2P50583 147 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 LCN2P80188 198 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 TNFAIP6P98066 277 aaPredicted RBP9.59□□□□□ -0.87
VPS28-214ENST00000531032 PRKCDQ05655 676 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 PSG7Q13046 419 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 CDK5R2Q13319 367 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 ANKDD1AQ495B1 522 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 ARL9Q6T311 187 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 ZNF771Q7L3S4 317 aaPredicted RBP9.59□□□□□ -0.87
VPS28-214ENST00000531032 ZER1Q7Z7L7 766 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 NRMQ8IXM6 262 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 OFCC1Q8IZS5 231 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 ZDHHC22Q8N966 263 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 FAM156AQ8NDB6 213 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 NPEPL1Q8NDH3 523 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 SGMS2Q8NHU3 365 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 ST7LQ8TDW4 575 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 DVL3Q92997 716 aaPredicted RBP9.59□□□□□ -0.87
VPS28-214ENST00000531032 ELAC2Q9BQ52 826 aaKnown RBP9.59□□□□□ -0.87
VPS28-214ENST00000531032 WACQ9BTA9 647 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 TBCCD1Q9NVR7 557 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 DCAF16Q9NXF7 216 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 UBAP1Q9NZ09 502 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 POLR3KQ9Y2Y1 108 aaPredicted RBP9.59□□□□□ -0.87
VPS28-214ENST00000531032 NPTNQ9Y639 398 aa9.59□□□□□ -0.87
VPS28-214ENST00000531032 NDUFAB1O14561 156 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 FFAR1O14842 300 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 TIMM8AO60220 97 aaPredicted RBP9.58□□□□□ -0.88
VPS28-214ENST00000531032 ZNF682O95780 498 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 ABHD16AO95870 558 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 SCG5P05408 212 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 GSTM3P21266 225 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 KITLGP21583 273 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 TUBG1P23258 451 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 SLC9A3P48764 834 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 SLC7A2P52569 658 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 UBA52P62987 128 aaKnown RBP9.58□□□□□ -0.88
VPS28-214ENST00000531032 HNRNPA0Q13151 305 aaKnown RBP9.58□□□□□ -0.88
VPS28-214ENST00000531032 AWAT1Q58HT5 328 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 OAFQ86UD1 273 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 TREML1Q86YW5 311 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 RNF113BQ8IZP6 322 aaKnown RBP9.58□□□□□ -0.88
VPS28-214ENST00000531032 ZNF283Q8N7M2 679 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 DEFB108BQ8NET1 73 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 OR13C2Q8NGS9 318 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 OR51A7Q8NH64 312 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 SAMD8Q96LT4 415 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 FNDC11Q9BVV2 318 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 EFCAB1Q9HAE3 211 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 NTN4Q9HB63 628 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 TUBG2Q9NRH3 451 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 TMEM106BQ9NUM4 274 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 RHCGQ9UBD6 479 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 PURGQ9UJV8 347 aaKnown RBP9.58□□□□□ -0.88
VPS28-214ENST00000531032 SNX13Q9Y5W8 968 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 MGAM2Q2M2H8 2515 aa9.58□□□□□ -0.88
VPS28-214ENST00000531032 EFCAB9A8MZ26 197 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 H7C1C5 153 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 J3KTA2 159 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 CDC42EP2O14613 210 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 AHCYL1O43865 530 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 DOK2O60496 412 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 IFNW1P05000 195 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 TNFSF4P23510 183 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 FPR2P25090 351 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 YAP1P46937 504 aaKnown RBP9.57□□□□□ -0.88
VPS28-214ENST00000531032 LCN6P62502 163 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 LIPEQ05469 1076 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 SCRN3Q0VDG4 424 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 TRAM2Q15035 370 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 TMEM155Q4W5P6 130 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 Q6ZR03 302 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 VASH1Q7L8A9 365 aaPredicted RBP9.57□□□□□ -0.88
VPS28-214ENST00000531032 FAM122BQ7Z309 247 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 VTCN1Q7Z7D3 282 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 CPLX4Q7Z7G2 160 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 SPICQ8N5J4 248 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 ACOT11Q8WXI4 607 aaPredicted RBP9.57□□□□□ -0.88
VPS28-214ENST00000531032 C22orf15Q8WYQ4 148 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 POP5Q969H6 163 aaKnown RBP9.57□□□□□ -0.88
VPS28-214ENST00000531032 FAM162AQ96A26 154 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 CMTM5Q96DZ9 223 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 SIGLEC11Q96RL6 698 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 HOPXQ9BPY8 73 aaPredicted RBP9.57□□□□□ -0.88
VPS28-214ENST00000531032 KCTD14Q9BQ13 255 aaPredicted RBP9.57□□□□□ -0.88
VPS28-214ENST00000531032 POFUT1Q9H488 388 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 EMC7Q9NPA0 242 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 MMP26Q9NRE1 261 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 CMTM6Q9NX76 183 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 GRHPRQ9UBQ7 328 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 ADAM18Q9Y3Q7 739 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 MEGF8Q7Z7M0 2845 aa9.57□□□□□ -0.88
VPS28-214ENST00000531032 A0A087WUU8 490 aa9.56□□□□□ -0.88
VPS28-214ENST00000531032 TEX13CA0A0J9YWL9 993 aa9.56□□□□□ -0.88
VPS28-214ENST00000531032 PRSS37A4D1T9 235 aa9.56□□□□□ -0.88
VPS28-214ENST00000531032 A8MXK9 166 aa9.56□□□□□ -0.88
VPS28-214ENST00000531032 F5H0A9 414 aaPredicted RBP9.56□□□□□ -0.88
VPS28-214ENST00000531032 CXCR6O00574 342 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms