RNA–Protein interactions for RNA: ENST00000530906.1

PCF11-205, Transcript of PCF11, cleavage and polyadenylation factor subunit, humanhuman

TSL 3

Gene PCF11, Length 628 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCF11-205ENST00000530906 STEAP1Q9UHE8 339 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ZNF107Q9UII5 783 aaPredicted RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 HHLA2Q9UM44 414 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 RBMX2Q9Y388 322 aaKnown RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 R4GMQ9 66 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 ASCC3Q8N3C0 2202 aaKnown RBP4.97□□□□□ -1.61
PCF11-205ENST00000530906 CDH23Q9H251 3354 aa4.97□□□□□ -1.61
PCF11-205ENST00000530906 IGHV3-20A0A0C4DH32 117 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 FAM221AA4D161 298 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 TVP23AA6NH52 213 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 AQP7P3A6NL99 342 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 PRR32B1ATL7 298 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 H7C1C5 153 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 SULT1C2O00338 296 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 SLC17A2O00624 439 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 DVL2O14641 736 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 TFECO14948 347 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 PIN1P1O15428 100 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 EEF1E1O43324 174 aaKnown RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 KRT33AO76009 404 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 RPP14O95059 124 aaKnown RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 PAHP00439 452 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 APOC1P02654 83 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 YES1P07947 543 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 ERCC1P07992 297 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 SPARCP09486 303 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 TFPIP10646 304 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 MYF5P13349 255 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 IFNGR1P15260 489 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 CTLA4P16410 223 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 LAP3P28838 519 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 PSMB10P40306 273 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 PTGDSP41222 190 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 SSR4P51571 173 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 DSCR4P56555 118 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 RRAS2P62070 204 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 LCN6P62502 163 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 CSNK2A1P68400 391 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 POU3F1Q03052 451 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 CHAF1BQ13112 559 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 MYBPHQ13203 477 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 EIF2B1Q14232 305 aaKnown RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 GPR176Q14439 515 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 ANGPT1Q15389 498 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 OR7A5Q15622 319 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 KCNJ8Q15842 424 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 BTBD16Q32M84 506 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 TBRG1Q3YBR2 411 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 WDR38Q5JTN6 314 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 ATAD3CQ5T2N8 411 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 DCAF12Q5T6F0 453 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 FAM69BQ5VUD6 431 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 C1QL3Q5VWW1 255 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 OLFML2AQ68BL7 652 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 GLT8D1Q68CQ7 371 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 FAM199XQ6PEV8 388 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 POMZP3Q6PJE2 187 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 NHLRC1Q6VVB1 395 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 DNM1P46Q6ZS02 220 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 SHISA6Q6ZSJ9 500 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 ASB18Q6ZVZ8 466 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 BTN2A1Q7KYR7 527 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 NDUFAF7Q7L592 441 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 FGD2Q7Z6J4 655 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 LRRTM1Q86UE6 522 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 CATSPERDQ86XM0 798 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 HIST2H2ABQ8IUE6 130 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 MAML2Q8IZL2 1156 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 CMTM4Q8IZR5 234 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 ZNF433Q8N7K0 673 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 ZBTB44Q8NCP5 570 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 NOXO1Q8NFA2 376 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 NLGN4YQ8NFZ3 816 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 OR10H5Q8NGA6 315 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 OR10G3Q8NGC4 313 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 OR6M1Q8NGM8 313 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 OR13C5Q8NGS8 318 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 OR56B4Q8NH76 319 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 PAQR8Q8TEZ7 354 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 RNF133Q8WVZ7 376 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 TSEN15Q8WW01 171 aaKnown RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 FCAMRQ8WWV6 532 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 AKAP1Q92667 903 aaKnown RBP eCLIP4.96□□□□□ -1.62
PCF11-205ENST00000530906 MR1Q95460 341 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 PNPLA2Q96AD5 504 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 ZNF524Q96C55 264 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 INTS12Q96CB8 462 aaKnown RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 ZNF486Q96H40 463 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 MED30Q96HR3 178 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 TMEM41AQ96HV5 264 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 ST6GAL2Q96JF0 529 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 OR2M2Q96R28 347 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 ABHD1Q96SE0 405 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 NAA11Q9BSU3 229 aaPredicted RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 MRPL13Q9BYD1 178 aaKnown RBP4.96□□□□□ -1.62
PCF11-205ENST00000530906 ULBP3Q9BZM4 244 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 SLCO5A1Q9H2Y9 848 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 ELOVL3Q9HB03 270 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 SCPEP1Q9HB40 452 aa4.96□□□□□ -1.62
PCF11-205ENST00000530906 NEK6Q9HC98 313 aa4.96□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 20.8 ms