RNA–Protein interactions for RNA: ENST00000528230.5

TRAPPC4-209, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3 BASIC

Gene TRAPPC4, Length 583 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-209ENST00000528230 ERVS71-1P61550 626 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 MRPS11P82912 194 aaKnown RBP10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 CARTPTQ16568 116 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 NKPD1Q17RQ9 610 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 PCGF3Q3KNV8 242 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 MBNL2Q5VZF2 373 aaKnown RBP10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 CYB5R2Q6BCY4 276 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 RASSF6Q6ZTQ3 369 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 ZBTB46Q86UZ6 589 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 JAZF1Q86VZ6 243 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 ZNF101Q8IZC7 436 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 MARS2Q96GW9 593 aaKnown RBP10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 CLPTM1LQ96KA5 538 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 C4orf45Q96LM5 186 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 NMNAT3Q96T66 252 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 BTBD10Q9BSF8 475 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 RACGAP1Q9H0H5 632 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR51B6Q9H340 312 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 TPK1Q9H3S4 243 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 RERGLQ9H628 205 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 REEP1Q9H902 201 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 HINT3Q9NQE9 182 aaKnown RBP10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 TBCCD1Q9NVR7 557 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 NKIRAS2Q9NYR9 191 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 ATPIF1Q9UII2 106 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 SAMHD1Q9Y3Z3 626 aaKnown RBP10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 CDH10Q9Y6N8 788 aa10.37□□□□□ -0.75
TRAPPC4-209ENST00000528230 NSD1Q96L73 2696 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 IGLV1-36A0A0B4J1U3 117 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 C17orf100A8MU93 164 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 DOK2O60496 412 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 CRLF1O75462 422 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 MPZL1O95297 269 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 MT-ND5P03915 603 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 TACSTD2P09758 323 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 NAT2P11245 290 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 ZNF23P17027 643 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 GSTM3P21266 225 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 GCH1P30793 250 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 LIPAP38571 399 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 GZMKP49863 264 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 PPP1CBP62140 327 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 GLO1Q04760 184 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 RIN1Q13671 783 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 GGTLC2Q14390 218 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 MAD2L1BPQ15013 274 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 MICAQ29983 383 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 ELFN2Q5R3F8 820 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 LEG1Q6P5S2 330 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 VASH1Q7L8A9 365 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR6V1Q8N148 313 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 GJC3Q8NFK1 279 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR9Q2Q8NGE9 314 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR52L1Q8NGH7 329 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR4K13Q8NH42 304 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 SLC25A40Q8TBP6 338 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 SNX33Q8WV41 574 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 IPCEF1Q8WWN9 437 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 RDH5Q92781 318 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 CCDC124Q96CT7 223 aaKnown RBP10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 SLC7A6OSQ96CW6 309 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 COG8Q96MW5 612 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 DCLRE1CQ96SD1 692 aaKnown RBP10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 CHID1Q9BWS9 393 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 DGCR6LQ9BY27 220 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 BPESC1Q9GZL8 116 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 SRA1Q9HD15 236 aaKnown RBP10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 YAE1D1Q9NRH1 226 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 CYSLTR2Q9NS75 346 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 PLEK2Q9NYT0 353 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 ASH2LQ9UBL3 628 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 CGGBP1Q9UFW8 167 aaPredicted RBP10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 ZANQ9Y493 2812 aa10.36□□□□□ -0.75
TRAPPC4-209ENST00000528230 NIPBLQ6KC79 2804 aaeCLIP10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 NAV3Q8IVL0 2385 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 IGHV4-61A0A0C4DH41 118 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR6C68A6NDL8 312 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 OR6C6A6NF89 314 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 A8MV72 311 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 J3QW42 95 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 DCTN6O00399 190 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 BHLHE40O14503 412 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 NGFP01138 241 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 HPXP02790 462 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 IGHV4-31P0DP07 118 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 GAAP10253 952 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 ACHEP22303 614 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 HTR5AP47898 357 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 TMEM33P57088 247 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 HIST1H3AP68431 136 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 COX10Q12887 443 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 SLC36A3Q495N2 470 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 CCDC92Q53HC0 331 aaPredicted RBP10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 C6orf52Q5T4I8 152 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 HIST2H3PS2Q5TEC6 136 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 TMEM154Q6P9G4 183 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 CD300LDQ6UXZ3 194 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 HIST2H3AQ71DI3 136 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 ADGRG5Q8IZF4 528 aa10.35□□□□□ -0.75
TRAPPC4-209ENST00000528230 LNX2Q8N448 690 aa10.35□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms