RNA–Protein interactions for RNA: ENST00000527920.5

SSSCA1-205, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 3 BASIC

Gene SSSCA1, Length 806 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-205ENST00000527920 ELOVL3Q9HB03 270 aa28.25■■■□□ 2.11
SSSCA1-205ENST00000527920 IDH3BO43837 385 aa28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 LILRA1O75019 489 aa28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 PPP1R3DO95685 299 aa28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 ZNF16P17020 682 aaPredicted RBP28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 PGBD2Q6P3X8 592 aa28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 TMEM154Q6P9G4 183 aa28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 PGM2L1Q6PCE3 622 aa28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 ZNF620Q6ZNG0 422 aa28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 RFPL4BQ6ZWI9 263 aa28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 ATPIF1Q9UII2 106 aa28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 CDC42EP3Q9UKI2 254 aa28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 COA3Q9Y2R0 106 aaPredicted RBP28.24■■■□□ 2.11
SSSCA1-205ENST00000527920 SGCEO43556 437 aa28.23■■■□□ 2.11
SSSCA1-205ENST00000527920 NCR1O76036 304 aa28.23■■■□□ 2.11
SSSCA1-205ENST00000527920 TUBG1P23258 451 aa28.23■■■□□ 2.11
SSSCA1-205ENST00000527920 GCH1P30793 250 aa28.23■■■□□ 2.11
SSSCA1-205ENST00000527920 RINLQ6ZS11 566 aa28.23■■■□□ 2.11
SSSCA1-205ENST00000527920 MSI2Q96DH6 328 aaKnown RBP28.23■■■□□ 2.11
SSSCA1-205ENST00000527920 C4orf45Q96LM5 186 aa28.23■■■□□ 2.11
SSSCA1-205ENST00000527920 TUBG2Q9NRH3 451 aa28.23■■■□□ 2.11
SSSCA1-205ENST00000527920 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP28.23■■■□□ 2.113e-7■■■■■ 26.8
SSSCA1-205ENST00000527920 LYNX1G3V0Z9 82 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 DOK2O60496 412 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 LYNX1P0DP58 116 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 ARHGDIAP52565 204 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 TMEM33P57088 247 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 PPP1CBP62140 327 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 CHRFAM7AQ494W8 412 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 FAM166AQ6J272 317 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 VASH1Q7L8A9 365 aaPredicted RBP28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 ABHD4Q8TB40 342 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 SLC25A40Q8TBP6 338 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 KLF14Q8TD94 323 aaPredicted RBP28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 RERGLQ9H628 205 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 TBCCD1Q9NVR7 557 aa28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 CGGBP1Q9UFW8 167 aaPredicted RBP28.22■■■□□ 2.11
SSSCA1-205ENST00000527920 HTR5AP47898 357 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 ALKBH6Q3KRA9 238 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 RPL13AP3Q6NVV1 102 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 JAZF1Q86VZ6 243 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 OR4C15Q8NGM1 316 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 ASB9Q96DX5 294 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 IFT27Q9BW83 186 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 OR2J1Q9GZK6 312 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 RACGAP1Q9H0H5 632 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 TAS2R1Q9NYW7 299 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 ASH2LQ9UBL3 628 aa28.21■■■□□ 2.11
SSSCA1-205ENST00000527920 IGLV1-36A0A0B4J1U3 117 aa28.2■■■□□ 2.1
SSSCA1-205ENST00000527920 TNFRSF11BO00300 401 aa28.2■■■□□ 2.1
SSSCA1-205ENST00000527920 MS4A2Q01362 244 aa28.2■■■□□ 2.1
SSSCA1-205ENST00000527920 SPATA46Q5T0L3 261 aa28.2■■■□□ 2.1
SSSCA1-205ENST00000527920 NPEPL1Q8NDH3 523 aa28.2■■■□□ 2.1
SSSCA1-205ENST00000527920 IPCEF1Q8WWN9 437 aaPredicted RBP28.2■■■□□ 2.1
SSSCA1-205ENST00000527920 SAMD8Q96LT4 415 aa28.2■■■□□ 2.1
SSSCA1-205ENST00000527920 CYSLTR2Q9NS75 346 aa28.2■■■□□ 2.1
SSSCA1-205ENST00000527920 PLEK2Q9NYT0 353 aa28.2■■■□□ 2.1
SSSCA1-205ENST00000527920 LPAR3Q9UBY5 353 aa28.2■■■□□ 2.1
SSSCA1-205ENST00000527920 LOC100289279A0A1B0GTE1 492 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 LRP5LA4QPB2 252 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 OR6C6A6NF89 314 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 LMX1BO60663 402 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 RP2O75695 350 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 ABHD16AO95870 558 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 RENP00797 406 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 NGFP01138 241 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 GAAP10253 952 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 HIST1H1CP16403 213 aaKnown RBP28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 COL8A2P25067 703 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 LIPAP38571 399 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 MPV17P39210 176 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 MAGEB1P43366 347 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 MMP15P51511 669 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 FAM98BQ52LJ0 330 aaKnown RBP28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 FAM209AQ5JX71 171 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 ZNF770Q6IQ21 691 aaPredicted RBP28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 LEG1Q6P5S2 330 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 NMNAT3Q96T66 252 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 BTBD10Q9BSF8 475 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 KCNS2Q9ULS6 477 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 CDH10Q9Y6N8 788 aa28.19■■■□□ 2.1
SSSCA1-205ENST00000527920 J3QW42 95 aa28.18■■■□□ 2.1
SSSCA1-205ENST00000527920 DCTN6O00399 190 aa28.18■■■□□ 2.1
SSSCA1-205ENST00000527920 MPZL1O95297 269 aa28.18■■■□□ 2.1
SSSCA1-205ENST00000527920 NOS3P29474 1203 aa28.18■■■□□ 2.1
SSSCA1-205ENST00000527920 GPR6P46095 362 aaPredicted RBP28.18■■■□□ 2.1
SSSCA1-205ENST00000527920 YIPF5Q969M3 257 aa28.18■■■□□ 2.1
SSSCA1-205ENST00000527920 C1orf159Q96HA4 380 aa28.18■■■□□ 2.1
SSSCA1-205ENST00000527920 TSSK2Q96PF2 358 aa28.18■■■□□ 2.1
SSSCA1-205ENST00000527920 ZNF275Q9NSD4 429 aaPredicted RBP28.18■■■□□ 2.1
SSSCA1-205ENST00000527920 B9D1Q9UPM9 204 aa28.18■■■□□ 2.1
SSSCA1-205ENST00000527920 ATRQ13535 2644 aa28.17■■■□□ 2.1
SSSCA1-205ENST00000527920 KIAA1324LA8MWY0 1029 aaPredicted RBP28.17■■■□□ 2.1
SSSCA1-205ENST00000527920 ADH4P08319 380 aa28.17■■■□□ 2.1
SSSCA1-205ENST00000527920 ZNF81P51508 661 aa28.17■■■□□ 2.1
SSSCA1-205ENST00000527920 CCL8P80075 99 aa28.17■■■□□ 2.1
SSSCA1-205ENST00000527920 GLO1Q04760 184 aa28.17■■■□□ 2.1
SSSCA1-205ENST00000527920 TMEM255AQ5JRV8 349 aa28.17■■■□□ 2.1
SSSCA1-205ENST00000527920 ZBTB46Q86UZ6 589 aa28.17■■■□□ 2.1
SSSCA1-205ENST00000527920 OR6V1Q8N148 313 aa28.17■■■□□ 2.1
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms