RNA–Protein interactions for RNA: ENST00000527916.1

CPSF1-203, Transcript of cleavage and polyadenylation specific factor 1, humanhuman

TSL 5

Gene CPSF1, Length 506 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF1-203ENST00000527916 PCGF3Q3KNV8 242 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 TBPL2Q6SJ96 375 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 DOK3Q7L591 496 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 SLC7A13Q8TCU3 470 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 NSMAFQ92636 917 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 YIPF5Q969M3 257 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 FAM162AQ96A26 154 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 C7orf34Q96L11 122 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 TSPAN32Q96QS1 320 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 NDEL1Q9GZM8 345 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 HINT3Q9NQE9 182 aaKnown RBP8.94□□□□□ -0.98
CPSF1-203ENST00000527916 NDUFAF4Q9P032 175 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 TAAR3PQ9P1P4 343 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 EIF3KQ9UBQ5 218 aaKnown RBP8.94□□□□□ -0.98
CPSF1-203ENST00000527916 GRHPRQ9UBQ7 328 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 FZR1Q9UM11 496 aa8.94□□□□□ -0.98
CPSF1-203ENST00000527916 SAMD4AQ9UPU9 718 aaKnown RBP8.94□□□□□ -0.98
CPSF1-203ENST00000527916 FAM32AQ9Y421 112 aaKnown RBP8.94□□□□□ -0.98
CPSF1-203ENST00000527916 LOC100509620A0A075B734 347 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 DNAJC9-AS1A6NH13 148 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 C12orf71A8MTZ7 269 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 H3BSA7 217 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 RP2O75695 350 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 ALX3O95076 343 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 MT-ND5P03915 603 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 H1F0P07305 194 aaKnown RBP8.93□□□□□ -0.98
CPSF1-203ENST00000527916 COX5BP10606 129 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 NAT2P11245 290 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 TUBG1P23258 451 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 LAP3P28838 519 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 LIPAP38571 399 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 GDI2P50395 445 aaKnown RBP8.93□□□□□ -0.98
CPSF1-203ENST00000527916 TEKQ02763 1124 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 BAMBIQ13145 260 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 TOP3AQ13472 1001 aaPredicted RBP8.93□□□□□ -0.98
CPSF1-203ENST00000527916 NKPD1Q17RQ9 610 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 ZNF718Q3SXZ3 478 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 FAM209AQ5JX71 171 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 MBNL2Q5VZF2 373 aaKnown RBP8.93□□□□□ -0.98
CPSF1-203ENST00000527916 GPR139Q6DWJ6 353 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 TMEM154Q6P9G4 183 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 FAM122BQ7Z309 247 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 IGFN1Q86VF2 1251 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 OR1J1Q8NGS3 322 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 OR13C2Q8NGS9 318 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 SNX33Q8WV41 574 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 DVL3Q92997 716 aaPredicted RBP8.93□□□□□ -0.98
CPSF1-203ENST00000527916 MARS2Q96GW9 593 aaKnown RBP8.93□□□□□ -0.98
CPSF1-203ENST00000527916 DHRS1Q96LJ7 313 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 DUX5Q96PT3 197 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 GPX7Q96SL4 187 aaPredicted RBP8.93□□□□□ -0.98
CPSF1-203ENST00000527916 PKP2Q99959 881 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 OR2H1Q9GZK4 316 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 NSRP1Q9H0G5 558 aaKnown RBP8.93□□□□□ -0.98
CPSF1-203ENST00000527916 WNT5BQ9H1J7 359 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 NRIP3Q9NQ35 241 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 TUBG2Q9NRH3 451 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 EGFL7Q9UHF1 273 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 SIGLEC7Q9Y286 467 aa8.93□□□□□ -0.98
CPSF1-203ENST00000527916 ARHGAP32A7KAX9 2087 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 PRSS37A4D1T9 235 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 C5orf49A4QMS7 147 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 XKRYO14609 159 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 GMNNO75496 209 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 NDUFB2O95178 105 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 FSHBP01225 129 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 RNASE1P07998 156 aaKnown RBP8.92□□□□□ -0.98
CPSF1-203ENST00000527916 ADH4P08319 380 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 HSD17B1P14061 328 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 NCK1P16333 377 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 ZNF26P17031 533 aaPredicted RBP8.92□□□□□ -0.98
CPSF1-203ENST00000527916 MSR1P21757 451 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 DRD4P21917 467 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 CCNOP22674 350 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 RPL4P36578 427 aaKnown RBP8.92□□□□□ -0.98
CPSF1-203ENST00000527916 CRYBB2P43320 205 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 MAGEB1P43366 347 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 GPR4P46093 362 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 OMPP47874 163 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 SMIM11AP58511 58 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 ERVS71-1P61550 626 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 ERVK-25P63136 954 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 MVKQ03426 396 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 ENDOGQ14249 297 aaKnown RBP8.92□□□□□ -0.98
CPSF1-203ENST00000527916 SPATS1Q496A3 300 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 ARL9Q6T311 187 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 CPLX4Q7Z7G2 160 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 ZNF101Q8IZC7 436 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 CLDN22Q8N7P3 220 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 AKR7LQ8NHP1 331 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 TIMD4Q96H15 378 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 Q96M85 177 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 FUZQ9BT04 418 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 C1QTNF5Q9BXJ0 243 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 ELOVL3Q9HB03 270 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 KRCC1Q9NPI7 259 aaPredicted RBP8.92□□□□□ -0.98
CPSF1-203ENST00000527916 POLE4Q9NR33 117 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 CYSLTR2Q9NS75 346 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 ADA2Q9NZK5 511 aa8.92□□□□□ -0.98
CPSF1-203ENST00000527916 CGGBP1Q9UFW8 167 aaPredicted RBP8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms