RNA–Protein interactions for RNA: ENST00000527253.2

PRPF40B-204, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 3

Gene PRPF40B, Length 742 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-204ENST00000527253 THBS2P35442 1172 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 ZNF81P51508 661 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 DVL1P1P54792 670 aaPredicted RBP8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 PCBD1P61457 104 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 PPP1CBP62140 327 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 MVKQ03426 396 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 PSG7Q13046 419 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 PCGF3Q3KNV8 242 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 KRTAP24-1Q3LI83 254 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 CCDC92Q53HC0 331 aaPredicted RBP8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 DPY19L2P2Q6ZN68 376 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 USP51Q70EK9 711 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 VASH1Q7L8A9 365 aaPredicted RBP8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 SYT9Q86SS6 491 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 ALDH16A1Q8IZ83 802 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 SNX33Q8WV41 574 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 SLC7A6Q92536 515 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 C4orf45Q96LM5 186 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 TSSK2Q96PF2 358 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 NUAK2Q9H093 628 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 NSRP1Q9H0G5 558 aaKnown RBP8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 RERGLQ9H628 205 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 LPAR2Q9HBW0 351 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 TMEFF2Q9UIK5 374 aaPredicted RBP8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 GPR160Q9UJ42 338 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 ARL2BPQ9Y2Y0 163 aa8.87□□□□□ -0.99
PRPF40B-204ENST00000527253 IGHV1-69-2A0A0G2JMI3 117 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 B4DSR2 109 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 SGCEO43556 437 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 GADD45GO95257 159 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 PPP1R3DO95685 299 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 GAAP10253 952 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 COX5BP10606 129 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 GCH1P30793 250 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 GUCA1AP43080 201 aaPredicted RBP8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 ERFP50548 548 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 SPIBQ01892 262 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 KCNMB1Q16558 191 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 MOGQ16653 247 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 MEP1BQ16820 701 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 RFX4Q33E94 735 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 SAMD4BQ5PRF9 694 aaKnown RBP8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 GPR139Q6DWJ6 353 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 SMARCD3Q6STE5 483 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 Q6ZR03 302 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 DEFB107AQ8IZN7 70 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 NSMCE2Q96MF7 247 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 WACQ9BTA9 647 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 MSL2Q9HCI7 577 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 DCAF16Q9NXF7 216 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 MAGEL2Q9UJ55 1249 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 AURKCQ9UQB9 309 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 STARD10Q9Y365 291 aa8.86□□□□□ -0.99
PRPF40B-204ENST00000527253 WNK2Q9Y3S1 2297 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 ARHGAP32A7KAX9 2087 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 FBN3Q75N90 2809 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 IGLV1-36A0A0B4J1U3 117 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 OR6C6A6NF89 314 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 RER1O15258 196 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 DOK2O60496 412 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 DEAF1O75398 565 aaPredicted RBP8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 GMNNO75496 209 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 UBOX5O94941 541 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 ABHD16AO95870 558 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 ADH4P08319 380 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 DBHP09172 617 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 ITGA2P17301 1181 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 ATP6V1B2P21281 511 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 FPR3P25089 353 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 RRM2P31350 389 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 HTR5AP47898 357 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 GSSP48637 474 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 LSM6P62312 80 aaKnown RBP8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 HIST1H3AP68431 136 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 SCRN3Q0VDG4 424 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 KRT72Q14CN4 511 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 RSPO1Q2MKA7 263 aaPredicted RBP8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 HIST2H3PS2Q5TEC6 136 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 HIST2H3AQ71DI3 136 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 GLB1L2Q8IW92 636 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 OR6V1Q8N148 313 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 FITM2Q8N6M3 262 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 OR1F12Q8NHA8 337 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 TMEM158Q8WZ71 300 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 CMBLQ96DG6 245 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 SAMD8Q96LT4 415 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 ERMAPQ96PL5 475 aaPredicted RBP8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 LRRC37BQ96QE4 947 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 OR52D1Q9H346 318 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 SAP30LQ9HAJ7 183 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 SRA1Q9HD15 236 aaKnown RBP8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 IL1RAPQ9NPH3 570 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 DECR2Q9NUI1 292 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 TBCCD1Q9NVR7 557 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 ASH2LQ9UBL3 628 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 NDRG4Q9ULP0 352 aaKnown RBP8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 B9D1Q9UPM9 204 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 GRIP1Q9Y3R0 1128 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 WIPI2Q9Y4P8 454 aa8.85□□□□□ -0.99
PRPF40B-204ENST00000527253 LHFPL6Q9Y693 200 aa8.85□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms