RNA–Protein interactions for RNA: ENST00000526553.5

CD44-223, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 4

Gene CD44, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-223ENST00000526553 KLK12Q9UKR0 248 aa2.92□□□□□ -1.94
CD44-223ENST00000526553 SLC17A4Q9Y2C5 497 aa2.92□□□□□ -1.94
CD44-223ENST00000526553 MARF1Q9Y4F3 1742 aaKnown RBP2.92□□□□□ -1.94
CD44-223ENST00000526553 THSD7BQ9C0I4 1608 aa2.92□□□□□ -1.94
CD44-223ENST00000526553 ARHGAP21Q5T5U3 1957 aa2.92□□□□□ -1.94
CD44-223ENST00000526553 ADGRB3O60242 1522 aa2.92□□□□□ -1.94
CD44-223ENST00000526553 DUOX2Q9NRD8 1548 aa2.92□□□□□ -1.94
CD44-223ENST00000526553 RIMS2Q9UQ26 1411 aa2.92□□□□□ -1.94
CD44-223ENST00000526553 PHLPP2Q6ZVD8 1323 aa2.92□□□□□ -1.94
CD44-223ENST00000526553 EP400Q96L91 3159 aa2.92□□□□□ -1.94
CD44-223ENST00000526553 DIP2AQ14689 1571 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 LTBP1Q14766 1721 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 NALCNQ8IZF0 1738 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 NHSL1Q5SYE7 1610 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 A0A0G2JN53 185 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 A0A1B0GUA9 196 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 ZNF726A6NNF4 738 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 KRTAP4-16G5E9R7 235 aaPredicted RBP2.91□□□□□ -1.94
CD44-223ENST00000526553 H3BNH8 94 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 M0R3G1 203 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 AKR7A2O43488 359 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 CHMP2AO43633 222 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 GKN3PP0CG01 181 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 TDGF1P13385 188 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 DCKP27707 260 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 HTR1EP28566 365 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 AQP2P41181 271 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 TDGF1P3P51864 188 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 PRPS1P60891 318 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 RAB11AP62491 216 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 RAD51Q06609 339 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 TWF1Q12792 350 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 ITIH4Q14624 930 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 RAB11BQ15907 218 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 ZNF630Q2M218 657 aaPredicted RBP2.91□□□□□ -1.94
CD44-223ENST00000526553 LRRC10Q5BKY1 277 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 CTRB2Q6GPI1 263 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 TMEM179Q6ZVK1 233 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 CMTM1Q8IZ96 169 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 C8orf31Q8N9H6 132 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 OR9G4Q8NGQ1 327 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 OR10R2Q8NGX6 335 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 ZNF502Q8TBZ5 544 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 DNAJC1Q96KC8 554 aaKnown RBP2.91□□□□□ -1.94
CD44-223ENST00000526553 NRTNQ99748 197 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 ZYG11BQ9C0D3 744 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 IL22Q9GZX6 179 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 RGCCQ9H4X1 137 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 UGT1A10Q9HAW8 530 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 PTTG3PQ9NZH4 202 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 ASXL1Q8IXJ9 1541 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 PHF3Q92576 2039 aaKnown RBP2.91□□□□□ -1.94
CD44-223ENST00000526553 CEP162Q5TB80 1403 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 MAST1Q9Y2H9 1570 aa2.91□□□□□ -1.94
CD44-223ENST00000526553 LRP5O75197 1615 aa2.9□□□□□ -1.94
CD44-223ENST00000526553 KIF15Q9NS87 1388 aa2.9□□□□□ -1.94
CD44-223ENST00000526553 CROCC2H7BZ55 1655 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 ARPC4-TTLL3A0A0A6YYG9 625 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 A0A1W2PRD5 423 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 XKRYO14609 159 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 CCNB2O95067 398 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 OTCP00480 354 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 HLA-HP01893 362 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 SERPINA5P05154 406 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 CSF3P09919 207 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 SMIM10L1P0DMW3 83 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 CALM1P0DP23 149 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 CALM2P0DP24 149 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 CALM3P0DP25 149 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 SLC26A3P40879 764 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 SLC11A1P49279 550 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 RORCP51449 518 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 DAOAP59103 153 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 EIF3EP60228 445 aaKnown RBP2.9□□□□□ -1.95
CD44-223ENST00000526553 STXBP1P61764 594 aaKnown RBP2.9□□□□□ -1.95
CD44-223ENST00000526553 ACTA2P62736 377 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 ACTG2P63267 376 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 ACTC1P68032 377 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 ACTA1P68133 377 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 DNAJC3Q13217 504 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 AQP6Q13520 282 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 C6orf89Q6UWU4 347 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 HDDC2Q7Z4H3 204 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 TMEM150AQ86TG1 271 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 APRG1Q8IVJ8 170 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 ZNF321PQ8N8H1 164 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 OR4F15Q8NGB8 312 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 LYPD6BQ8NI32 183 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 DTX3LQ8TDB6 740 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 MCOLN3Q8TDD5 553 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 FAM151AQ8WW52 585 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 CAPSLQ8WWF8 208 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 NDRG1Q92597 394 aaKnown RBP2.9□□□□□ -1.95
CD44-223ENST00000526553 SMIM10Q96HG1 83 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 P2RX4Q99571 388 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 MMP26Q9NRE1 261 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 CCL28Q9NRJ3 127 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 NUFIP1Q9UHK0 495 aaKnown RBP2.9□□□□□ -1.95
CD44-223ENST00000526553 ARHGAP31Q2M1Z3 1444 aa2.9□□□□□ -1.95
CD44-223ENST00000526553 SETD5Q9C0A6 1442 aa2.9□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms