RNA–Protein interactions for RNA: ENST00000526025.1

CD44-222, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 2 BASIC

Gene CD44, Length 1,052 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-222ENST00000526025 SLC30A7Q8NEW0 376 aa18■□□□□ 0.47
CD44-222ENST00000526025 BBS1Q8NFJ9 593 aa18■□□□□ 0.47
CD44-222ENST00000526025 OR4F15Q8NGB8 312 aa18■□□□□ 0.47
CD44-222ENST00000526025 FAM81AQ8TBF8 368 aa18■□□□□ 0.47
CD44-222ENST00000526025 CDADC1Q9BWV3 514 aa18■□□□□ 0.47
CD44-222ENST00000526025 VCX3BQ9H321 246 aa18■□□□□ 0.47
CD44-222ENST00000526025 PLEKHF2Q9H8W4 249 aa18■□□□□ 0.47
CD44-222ENST00000526025 FBN2P35556 2912 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 A0A1W2PPR1 153 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 SLC22A31A6NKX4 558 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 SGCEO43556 437 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 MPZL2O60487 215 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 ATP6V1G2O95670 118 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 ZNF35P13682 527 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 DBPQ10586 325 aaPredicted RBP17.99■□□□□ 0.47
CD44-222ENST00000526025 TMED1Q13445 227 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 APOFQ13790 326 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 GGTLC2Q14390 218 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 RAB35Q15286 201 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 TBC1D28Q2M2D7 210 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 ZNF672Q499Z4 452 aaPredicted RBP17.99■□□□□ 0.47
CD44-222ENST00000526025 KLHL12Q53G59 568 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 TTC23Q5W5X9 447 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 SLC22A25Q6T423 547 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 MEPCEQ7L2J0 689 aaKnown RBP17.99■□□□□ 0.47
CD44-222ENST00000526025 PIAS4Q8N2W9 510 aaPredicted RBP17.99■□□□□ 0.47
CD44-222ENST00000526025 ZNF511Q8NB15 262 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 CPEB3Q8NE35 698 aaKnown RBP17.99■□□□□ 0.47
CD44-222ENST00000526025 OR2AJ1Q8NGZ0 328 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 IPCEF1Q8WWN9 437 aaPredicted RBP17.99■□□□□ 0.47
CD44-222ENST00000526025 MS4A3Q96HJ5 214 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 INTS14Q96SY0 518 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 TEAD3Q99594 435 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 HDHD2Q9H0R4 259 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 HAO2Q9NYQ3 351 aa17.99■□□□□ 0.47
CD44-222ENST00000526025 H2AFY2Q9P0M6 372 aaPredicted RBP17.99■□□□□ 0.47
CD44-222ENST00000526025 GDF2Q9UK05 429 aaPredicted RBP17.99■□□□□ 0.47
CD44-222ENST00000526025 AKAP6Q13023 2319 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 SPG11Q96JI7 2443 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 CCDC182A6NF36 153 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 OR6C6A6NF89 314 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 TVP23AA6NH52 213 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 M0R129 80 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 DOK2O60496 412 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 ICMTO60725 284 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 STOMP27105 288 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 CALCRP30988 508 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 APLNRP35414 380 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 SPOCK1Q08629 439 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 MEDAGQ5VYS4 303 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 VASH1Q7L8A9 365 aaPredicted RBP17.98■□□□□ 0.47
CD44-222ENST00000526025 SHFQ7M4L6 423 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 TIGD4Q8IY51 512 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 NUP37Q8NFH4 326 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 KBTBD8Q8NFY9 601 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 AKR7LQ8NHP1 331 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 RFKQ969G6 155 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 IL4I1Q96RQ9 567 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 APOL4Q9BPW4 351 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 WDR76Q9H967 626 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 PLEK2Q9NYT0 353 aa17.98■□□□□ 0.47
CD44-222ENST00000526025 ATP6V1G2-DDX39BF2Z307 99 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 H0YAE9 185 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 ZNF593O00488 134 aaPredicted RBP17.97■□□□□ 0.47
CD44-222ENST00000526025 HS3ST1O14792 307 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 SYNGR3O43761 229 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 PLAUP00749 431 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 APEX1P27695 318 aaKnown RBP17.97■□□□□ 0.47
CD44-222ENST00000526025 PCSK6P29122 969 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 RPS7P62081 194 aaKnown RBP17.97■□□□□ 0.47
CD44-222ENST00000526025 ECH1Q13011 328 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 IL18R1Q13478 541 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 OCLNQ16625 522 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 CCDC92Q53HC0 331 aaPredicted RBP17.97■□□□□ 0.47
CD44-222ENST00000526025 ELFN2Q5R3F8 820 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 ZNF774Q6NX45 483 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 LYPD4Q6UWN0 246 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 C20orf204Q6ZNR8 217 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 DHRSXQ8N5I4 330 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 ZNF454Q8N9F8 522 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 LILRB1Q8NHL6 650 aaPredicted RBP17.97■□□□□ 0.47
CD44-222ENST00000526025 NRG4Q8WWG1 115 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 ZMYND19Q96E35 227 aaPredicted RBP17.97■□□□□ 0.47
CD44-222ENST00000526025 POM121L2Q96KW2 1035 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 COQ7Q99807 217 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 WARS2Q9UGM6 360 aaKnown RBP17.97■□□□□ 0.47
CD44-222ENST00000526025 SPEF1Q9Y4P9 236 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 DSCAMO60469 2012 aa17.97■□□□□ 0.47
CD44-222ENST00000526025 SETXQ7Z333 2677 aaKnown RBP17.97■□□□□ 0.47
CD44-222ENST00000526025 ANKRD17O75179 2603 aaKnown RBP17.96■□□□□ 0.47
CD44-222ENST00000526025 RER1O15258 196 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 GABRB1P18505 474 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 HTR1FP30939 366 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 GDI2P50395 445 aaKnown RBP17.96■□□□□ 0.47
CD44-222ENST00000526025 CDH11P55287 796 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 ADARB1P78563 741 aaKnown RBP17.96■□□□□ 0.47
CD44-222ENST00000526025 RHOUQ7L0Q8 258 aa17.96■□□□□ 0.47
CD44-222ENST00000526025 ZSCAN2Q7Z7L9 614 aaPredicted RBP17.96■□□□□ 0.47
CD44-222ENST00000526025 ERI1Q8IV48 349 aaKnown RBP17.96■□□□□ 0.47
CD44-222ENST00000526025 C1orf174Q8IYL3 243 aa17.96■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 76 ms