RNA–Protein interactions for RNA: ENST00000525348.1

CD44-217, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 568 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-217ENST00000525348 SCGB2A1O75556 95 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 H6PDO95479 791 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 LY6G6DO95868 133 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 CCNE2O96020 404 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 CYB5R3P00387 301 aaPredicted RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 ERCC1P07992 297 aaPredicted RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 NELFEP18615 380 aaKnown RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 GZMHP20718 246 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 FASP25445 335 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 GTF2E2P29084 291 aaKnown RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 MARCKSP29966 332 aaPredicted RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 ERP29P30040 261 aaKnown RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 FRKP42685 505 aaPredicted RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 GNPDA1P46926 289 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 STK19P49842 368 aaPredicted RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 SERPINH1P50454 418 aaKnown RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 CCR6P51684 374 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 ATP5IP56385 69 aaPredicted RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 RGS8P57771 180 aaPredicted RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 LSM6P62312 80 aaKnown RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 HERV-K104P63124 156 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 HERVK_113P63132 956 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 TNNC1P63316 161 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 GTF2BQ00403 316 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 NAAAQ02083 359 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 BDH1Q02338 343 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 SLC34A1Q06495 639 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 GABPAQ06546 454 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 PDZK1IP1Q13113 114 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 BTN1A1Q13410 526 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 SERTAD2Q14140 314 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 KCNJ11Q14654 390 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 SLC17A1Q14916 467 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 TRAM1Q15629 374 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 TMEM249Q2WGJ8 235 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 C18orf21Q32NC0 220 aaPredicted RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 RFX4Q33E94 735 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 ZNF528Q3MIS6 628 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 CARD17Q5XLA6 110 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 REEP3Q6NUK4 255 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 LPCAT3Q6P1A2 487 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 FAHD2BQ6P2I3 314 aaPredicted RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 BTNL3Q6UXE8 466 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 HSDL2Q6YN16 418 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 ZNF767PQ75MW2 155 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 LRRC70Q7Z2Q7 622 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 MRPL21Q7Z2W9 205 aaKnown RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 LYG2Q86SG7 212 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 GALNT10Q86SR1 603 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 ECHDC2Q86YB7 292 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 ZDHHC21Q8IVQ6 265 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 SERPINA12Q8IW75 414 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 AQP12AQ8IXF9 295 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 KIF2BQ8N4N8 673 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 TMEM156Q8N614 296 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 PQLC3Q8N755 202 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 COLGALT1Q8NBJ5 622 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 CLEC1AQ8NC01 280 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 OR7G3Q8NG95 312 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 OR8J3Q8NGG0 315 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 STOML3Q8TAV4 291 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 SELENOMQ8WWX9 145 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 BADQ92934 168 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 FAM46BQ96A09 425 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 HAVCR1Q96D42 359 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 FAHD2AQ96GK7 314 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 CAPZA3Q96KX2 299 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 NPY6RQ99463 290 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 RNF2Q99496 336 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 NIPSNAP1Q9BPW8 284 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 TMEM109Q9BVC6 243 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 MRPS26Q9BYN8 205 aaKnown RBP2.87□□□□□ -1.95
CD44-217ENST00000525348 UCK2Q9BZX2 261 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 ZNF350Q9GZX5 532 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 ZBP1Q9H171 429 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 TMEM38AQ9H6F2 299 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 NT5DC2Q9H857 520 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 FN3KRPQ9HA64 309 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 FBXO8Q9NRD0 319 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 TAS2R9Q9NYW1 312 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 ADA2Q9NZK5 511 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 OR12D3Q9UGF7 316 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 STOML2Q9UJZ1 356 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 PLA2G4CQ9UP65 541 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 PSG11Q9UQ72 335 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 C1orf167Q5SNV9 1468 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 NWD2Q9ULI1 1742 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 SLIT2O94813 1529 aa2.87□□□□□ -1.95
CD44-217ENST00000525348 LAMC1P11047 1609 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 KDM6AO15550 1401 aaPredicted RBP2.86□□□□□ -1.95
CD44-217ENST00000525348 NOS1P29475 1434 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 TNS2Q63HR2 1409 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 ADAMTS13Q76LX8 1427 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 MYH1P12882 1939 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 MYH2Q9UKX2 1941 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 MYH4Q9Y623 1939 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 A0A1B0GW15 77 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 A0A1W2PNV4 684 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 NPIPA7E9PJI5 369 aa2.86□□□□□ -1.95
CD44-217ENST00000525348 G3V2T6 193 aa2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms