RNA–Protein interactions for RNA: ENST00000525315.5

CTSB-209, Transcript of cathepsin B, humanhuman

TSL 2

Gene CTSB, Length 586 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-209ENST00000525315 BCL2L14Q9BZR8 327 aa11.14□□□□□ -0.63
CTSB-209ENST00000525315 FN3KQ9H479 309 aa11.14□□□□□ -0.63
CTSB-209ENST00000525315 ZNF556Q9HAH1 456 aa11.14□□□□□ -0.63
CTSB-209ENST00000525315 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.14□□□□□ -0.63
CTSB-209ENST00000525315 C5orf49A4QMS7 147 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 H3BN98 237 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 SGCEO43556 437 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 SYNGR3O43761 229 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 F12P00748 615 aaPredicted RBP11.13□□□□□ -0.63
CTSB-209ENST00000525315 FAM157BP0CG42 384 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 FCGR1AP12314 374 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 GRK5P34947 590 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 WNT5AP41221 380 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 CENPAP49450 140 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 PPOXP50336 477 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 DAPP51397 102 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 EFNA4P52798 201 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 SLC25A1P53007 311 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 ACTR3P61158 418 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 CDK5Q00535 292 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 DBPQ10586 325 aaPredicted RBP11.13□□□□□ -0.63
CTSB-209ENST00000525315 MEP1BQ16820 701 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 CLEC12BQ2HXU8 276 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 OTPQ5XKR4 325 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 FAHD1Q6P587 224 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 VASH1Q7L8A9 365 aaPredicted RBP11.13□□□□□ -0.63
CTSB-209ENST00000525315 C1orf174Q8IYL3 243 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 SVOPLQ8N434 492 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 GJC3Q8NFK1 279 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 TEX47Q8TBZ9 253 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 ZNRF4Q8WWF5 429 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 DNAJC9Q8WXX5 260 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 CMC2Q9NRP2 79 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 ASH2LQ9UBL3 628 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 EIF3KQ9UBQ5 218 aaKnown RBP11.13□□□□□ -0.63
CTSB-209ENST00000525315 NDRG4Q9ULP0 352 aaKnown RBP11.13□□□□□ -0.63
CTSB-209ENST00000525315 LHFPL6Q9Y693 200 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 CR1P17927 2039 aa11.13□□□□□ -0.63
CTSB-209ENST00000525315 IGLV3-9A0A075B6K5 115 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 OR6C6A6NF89 314 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 FAM171A2A8MVW0 826 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 SSX4O60224 188 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 CCNOP22674 350 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 GGT2P36268 569 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 CRMP1Q14194 572 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 GINS1Q14691 196 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 RGS7BPQ6MZT1 257 aaPredicted RBP11.12□□□□□ -0.63
CTSB-209ENST00000525315 SLC27A4Q6P1M0 643 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 AMIGO2Q86SJ2 522 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 LRP11Q86VZ4 500 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 HIPK1Q86Z02 1210 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 ZNF101Q8IZC7 436 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 ATG16L2Q8NAA4 619 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 OR10H5Q8NGA6 315 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 OR2T4Q8NH00 348 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 LRTOMTQ8WZ04 291 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 PTP4A1Q93096 173 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 C4orf45Q96LM5 186 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 MRPL22Q9NWU5 206 aaKnown RBP11.12□□□□□ -0.63
CTSB-209ENST00000525315 PLEK2Q9NYT0 353 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 CYB5R1Q9UHQ9 305 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 ATPIF1Q9UII2 106 aa11.12□□□□□ -0.63
CTSB-209ENST00000525315 G3V2T6 193 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 RER1O15258 196 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 DOK2O60496 412 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 NGFP01138 241 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 IFNGP01579 166 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 HMGN1P05114 100 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 LCKP06239 509 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 TUBG1P23258 451 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 POU1F1P28069 291 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 PYCR1P32322 319 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 CRISP1P54107 249 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 DSCR9P59020 149 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 TNK1Q13470 666 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 KPNB1Q14974 876 aaKnown RBP11.11□□□□□ -0.63
CTSB-209ENST00000525315 PCK2Q16822 640 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 RSPO1Q2MKA7 263 aaPredicted RBP11.11□□□□□ -0.63
CTSB-209ENST00000525315 SLC18B1Q6NT16 456 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 ARL9Q6T311 187 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 UNQ6126/PRO20091Q6UXV3 157 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 PARP8Q8N3A8 854 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 IQCF1Q8N6M8 205 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 OR1J1Q8NGS3 322 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 OR1F12Q8NHA8 337 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 SYNPRQ8TBG9 265 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 MARS2Q96GW9 593 aaKnown RBP11.11□□□□□ -0.63
CTSB-209ENST00000525315 CENPNQ96H22 339 aaPredicted RBP11.11□□□□□ -0.63
CTSB-209ENST00000525315 C18orf12Q96KH6 178 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 SORCS2Q96PQ0 1159 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 VRK1Q99986 396 aaPredicted RBP11.11□□□□□ -0.63
CTSB-209ENST00000525315 CDADC1Q9BWV3 514 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 RAB1BQ9H0U4 201 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 OR51B6Q9H340 312 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 ELOVL3Q9HB03 270 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 SLC25A19Q9HC21 320 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 TUBG2Q9NRH3 451 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 PAPOLBQ9NRJ5 636 aaKnown RBP11.11□□□□□ -0.63
CTSB-209ENST00000525315 TBCCD1Q9NVR7 557 aa11.11□□□□□ -0.63
CTSB-209ENST00000525315 MYEF2Q9P2K5 600 aaKnown RBP11.11□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms