RNA–Protein interactions for RNA: ENST00000525121.2

HMGB1P40-201, Transcript of high mobility group box 1 pseudogene 40, humanhuman

BASIC

Gene HMGB1P40, Length 540 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P40-201ENST00000525121 HS3ST5Q8IZT8 346 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR6V1Q8N148 313 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 IQCF1Q8N6M8 205 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 NPEPL1Q8NDH3 523 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SLC26A10Q8NG04 563 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR5L1Q8NGL2 311 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR9Q1Q8NGQ5 310 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR1J1Q8NGS3 322 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR4Q3Q8NH05 313 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR1F12Q8NHA8 337 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 AKR7LQ8NHP1 331 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 FGFBP3Q8TAT2 258 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ABHD4Q8TB40 342 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SYNPRQ8TBG9 265 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SPTSSAQ969W0 71 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 MRPL24Q96A35 216 aaKnown RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 TSSK2Q96PF2 358 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 DCLRE1CQ96SD1 692 aaKnown RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 PITX2Q99697 317 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 COQ7Q99807 217 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 VRK1Q99986 396 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 GABARAPL1Q9H0R8 117 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 RAB1BQ9H0U4 201 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 WNT5BQ9H1J7 359 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SEMA6AQ9H2E6 1030 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 CXXC4Q9H2H0 198 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR51B6Q9H340 312 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SLC25A19Q9HC21 320 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 TUBG2Q9NRH3 451 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF701Q9NV72 531 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SLCO1C1Q9NYB5 712 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 H2AFY2Q9P0M6 372 aaPredicted RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 DUSP13Q9UII6 198 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 OAZ3Q9UMX2 235 aa4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 SETXQ7Z333 2677 aaKnown RBP4.67□□□□□ -1.66
HMGB1P40-201ENST00000525121 MPDZO75970 2070 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 UTP20O75691 2785 aaKnown RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 PLSCR5A0PG75 271 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 FAM183AA6NL82 134 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 J3QW42 95 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 OVOL3O00110 214 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 DCTN6O00399 190 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 RER1O15258 196 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 SURF4O15260 269 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 PRODHO43272 600 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 TPD52L2O43399 206 aaKnown RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 SYNGR3O43761 229 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 GPRIN2O60269 458 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 MPZL1O95297 269 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 BAG2O95816 211 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 GYPBP06028 91 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 IGFBP1P08833 259 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 GAAP10253 952 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 CCL2P13500 99 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 PAX1P15863 534 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 GSTT1P30711 240 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 SLC15A1P46059 708 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 ENTPD1P49961 510 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 DAPP51397 102 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 EFNA4P52798 201 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 CRISP1P54107 249 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 DSCR9P59020 149 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 PPP1CBP62140 327 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 MALLQ13021 153 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 CARTPTQ16568 116 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 MEP1BQ16820 701 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 KLHL12Q53G59 568 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 SLC35D3Q5M8T2 416 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 C11orf71Q6IPW1 123 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 PLBD1Q6P4A8 553 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 TMEM154Q6P9G4 183 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 CORO6Q6QEF8 472 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 VASH1Q7L8A9 365 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 CXXC5Q7LFL8 322 aaKnown RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 SHFQ7M4L6 423 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 TGIF2LYQ8IUE0 185 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 ERI1Q8IV48 349 aaKnown RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 LINC00346Q8IVM7 164 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 PQLC1Q8N2U9 271 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 CPEB3Q8NE35 698 aaKnown RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR51L1Q8NGJ5 315 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR6N2Q8NGY6 317 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 NEU4Q8WWR8 484 aaPredicted RBP4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 EME1Q96AY2 570 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 POM121L2Q96KW2 1035 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 C4orf45Q96LM5 186 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 ZNF75AQ96N20 296 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 INTS14Q96SY0 518 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 CIB1Q99828 191 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 ATF6BQ99941 703 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 PKP2Q99959 881 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 SYT3Q9BQG1 590 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 RHNO1Q9BSD3 238 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 COPS4Q9BT78 406 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 C9orf16Q9BUW7 83 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 OR51V1Q9H2C8 321 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 MS4A5Q9H3V2 200 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 RIBC2Q9H4K1 309 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 SP140LQ9H930 580 aa4.66□□□□□ -1.66
HMGB1P40-201ENST00000525121 NTN4Q9HB63 628 aa4.66□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms