RNA–Protein interactions for RNA: ENST00000524922.1

CD44-212, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 352 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-212ENST00000524922 ZNF620Q6ZNG0 422 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 IKBIPQ70UQ0 350 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 DET1Q7L5Y6 550 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PRSS41Q7RTY9 318 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ZNF550Q7Z398 422 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CCDC91Q7Z6B0 441 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 MTERF4Q7Z6M4 381 aaKnown RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 ADCK1Q86TW2 530 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 KATNAL2Q8IYT4 538 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 GCNT2Q8N0V5 402 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ZNF567Q8N184 647 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 RIBC1Q8N443 379 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 SPICQ8N5J4 248 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CLDN19Q8N6F1 224 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ZNF433Q8N7K0 673 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 ZNF615Q8N8J6 731 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CNEP1R1Q8N9A8 125 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 POMGNT2Q8NAT1 580 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 KCTD6Q8NC69 237 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CCNYQ8ND76 341 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 DEFB108BQ8NET1 73 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 OR52B6Q8NGF0 335 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 OR13C4Q8NGS5 318 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 OR2V1Q8NHB1 315 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 LINC01006Q8NI28 216 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 FNDC9Q8TBE3 224 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 TRAF3IP1Q8TDR0 691 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 NAT14Q8WUY8 206 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 SLC5A11Q8WWX8 675 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PYCR2Q96C36 320 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 TUBGCP3Q96CW5 907 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 MS4A6EQ96DS6 147 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 TIMD4Q96H15 378 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 DNAJC1Q96KC8 554 aaKnown RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 CAPZA3Q96KX2 299 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 C4orf45Q96LM5 186 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 C2orf48Q96LS8 159 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 MAGEB18Q96M61 343 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 VSTM2LQ96N03 204 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 LINC00167Q96N53 147 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 AMDHD1Q96NU7 426 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PRAP1Q96NZ9 151 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 COL21A1Q96P44 957 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 SMIM14Q96QK8 99 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 DOK1Q99704 481 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 NKX3-1Q99801 234 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 SLC6A7Q99884 636 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 TBL1YQ9BQ87 522 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 RHOXF2Q9BQY4 288 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CENPKQ9BS16 269 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CCDC28BQ9BUN5 200 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 NTMT1Q9BV86 223 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 FNDC11Q9BVV2 318 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 KIFC1Q9BW19 673 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ZNF717Q9BY31 904 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 PANK2Q9BZ23 570 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 KLHL4Q9C0H6 718 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 OR8D2Q9GZM6 311 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 HOXD1Q9GZZ0 328 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 C1orf198Q9H425 327 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ZNF665Q9H7R5 613 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 DCLRE1BQ9H816 532 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 METTL7AQ9H8H3 244 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 WDR41Q9HAD4 459 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CXorf21Q9HAI6 301 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PARVBQ9HBI1 364 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 POPDC3Q9HBV1 291 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 B3GAT2Q9NPZ5 323 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 CHMP5Q9NZZ3 219 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 DNAH2Q9P225 4427 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 STOX2Q9P2F5 926 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 PCSK1NQ9UHG2 260 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PURGQ9UJV8 347 aaKnown RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 ANAPC5Q9UJX4 755 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PACSIN2Q9UNF0 486 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 MOKQ9UQ07 419 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 PDE10AQ9Y233 779 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 ZNF256Q9Y2P7 627 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 CAB39Q9Y376 341 aaPredicted RBP1.19□□□□□ -2.22
CD44-212ENST00000524922 DHRS7Q9Y394 339 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 OR10H1Q9Y4A9 318 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 TTLL3Q9Y4R7 772 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 RNF213Q63HN8 5207 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 MED12LQ86YW9 2145 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 NINQ8N4C6 2090 aa1.19□□□□□ -2.22
CD44-212ENST00000524922 HSPG2P98160 4391 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 IGLV4-3A0A075B6K6 122 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 TRBV5-5A0A0J9YX44 114 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 SNURFLB1AK76 121 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 G3V4G9 280 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 H0YAE9 185 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 H0YIV9 168 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 K7EIL1 84 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 M0R233 179 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 FAAHO00519 579 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 PHYHO14832 338 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 POLR3GO15318 223 aaPredicted RBP1.18□□□□□ -2.22
CD44-212ENST00000524922 TAPBPO15533 448 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 FADS1O60427 444 aa1.18□□□□□ -2.22
CD44-212ENST00000524922 TSPAN2O60636 221 aa1.18□□□□□ -2.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms