RNA–Protein interactions for RNA: ENST00000524356.1

PCM1-223, Transcript of pericentriolar material 1, human

TSL 2

Gene PCM1, Length 577 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PCM1-223	ENST00000524356	FAHD2B	Q6P2I3	314 aa	Predicted RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	SLC25A48	Q6ZT89	311 aa	Known RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	PAGE2	Q7Z2X7	111 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	SH2D6	Q7Z4S9	175 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ISCA2	Q86U28	154 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ZNF546	Q86UE3	836 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	PLA2G4D	Q86XP0	818 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	STX12	Q86Y82	276 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	SLC22A15	Q8IZD6	547 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	KIR3DL3	Q8N743	410 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	TPRX1	Q8N7U7	411 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	C15orf54	Q8N8G6	183 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	TTC29	Q8NA56	475 aa	Predicted RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	NECAP1	Q8NC96	275 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ZNF248	Q8NDW4	579 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	OR52H1	Q8NGJ2	320 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	RPLP0P6	Q8NHW5	317 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ERMN	Q8TAM6	284 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	TBCK	Q8TEA7	893 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ACOT11	Q8WXI4	607 aa	Predicted RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	TMEM143	Q96AN5	459 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ELSPBP1	Q96BH3	223 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ANKRD9	Q96BM1	317 aa	Predicted RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	CCDC127	Q96BQ5	260 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	BIRC7	Q96CA5	298 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	FAHD2A	Q96GK7	314 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	FAM218A	Q96MZ4	157 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	RNF2	Q99496	336 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ATP5S	Q99766	215 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	RHNO1	Q9BSD3	238 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	RAB34	Q9BZG1	259 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	SLC38A1	Q9H2H9	487 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	RNF41	Q9H4P4	317 aa	Predicted RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	MRM3	Q9HC36	420 aa	Known RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ANKH	Q9HCJ1	492 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	TREX1	Q9NSU2	369 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	CUTC	Q9NTM9	273 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	TEX10	Q9NXF1	929 aa	Predicted RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	WRAP73	Q9P2S5	460 aa	Predicted RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ABCD2	Q9UBJ2	740 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	VDAC3	Q9Y277	283 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	NEUROG3	Q9Y4Z2	214 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	CDH10	Q9Y6N8	788 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	SPTAN1	Q13813	2472 aa	Known RBP	3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	MYH6	P13533	1939 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	ABCA12	Q86UK0	2595 aa		3.54	□□□□□ -1.84
PCM1-223	ENST00000524356	UBR5	O95071	2799 aa	Predicted RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	COL1A2	P08123	1366 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	SHROOM3	Q8TF72	1996 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	MTCL1	Q9Y4B5	1905 aa	Known RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	UQCRHL	A0A096LP55	91 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356		A0A1W2PNU3	283 aa	Predicted RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	TMEM213	A2RRL7	107 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	MYBPHL	A2RUH7	354 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	VSTM2B	A6NLU5	285 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356		E7ESA3	106 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	PRAMEF26	H0Y7S4	382 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	BLOC1S5-TXNDC5	H3BN57	136 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	KLRC4-KLRK1	H3BQV0	150 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	SMLR1	H3BR10	107 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	GPR171	O14626	319 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	LIN7A	O14910	233 aa	Predicted RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	TOX3	O15405	576 aa	Predicted RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	B4GALT5	O43286	388 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	SLC19A2	O60779	497 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	ERLIN2	O94905	339 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	HP	P00738	406 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	UQCRH	P07919	91 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	KRT7	P08729	469 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	CFC1B	P0CG36	223 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	CFC1	P0CG37	223 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	TRIM49	P0CI25	452 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	TRIM49C	P0CI26	452 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	PRSS56	P0CW18	603 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	SLC2A2	P11168	524 aa	Predicted RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	POLR2E	P19388	210 aa	Known RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	NPR2	P20594	1047 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	AQP2	P41181	271 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	SOX3	P41225	446 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	XCR1	P46094	333 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	CSNK1A1	P48729	337 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	ATP6V0D1	P61421	351 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	RPS15A	P62244	130 aa	Known RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	RPS14	P62263	151 aa	Known RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	RPL8	P62917	257 aa	Known RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	PAX2	Q02962	417 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	CD226	Q15762	336 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	SNCB	Q16143	134 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	TNXA	Q16473	311 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	PAN3	Q58A45	887 aa	Known RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	CLEC18B	Q6UXF7	455 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	CERS6	Q6ZMG9	384 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	ZNF836	Q6ZNA1	936 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	IQCK	Q8N0W5	287 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	ATP6V0D2	Q8N8Y2	350 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	OR6F1	Q8NGZ6	308 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	LGALS14	Q8TCE9	139 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	AEN	Q8WTP8	325 aa	Known RBP	3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	ISOC2	Q96AB3	205 aa		3.53	□□□□□ -1.84
PCM1-223	ENST00000524356	FAF2	Q96CS3	445 aa		3.53	□□□□□ -1.84

Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms