RNA–Protein interactions for RNA: ENST00000523125.5

VEGFA-223, Transcript of vascular endothelial growth factor A, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VEGFA, Length 541 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-223ENST00000523125 ZSCAN5BA6NJL1 495 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 B4DSR2 109 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 H3BSA7 217 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 SOCS2O14508 198 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 SLC16A7O60669 478 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 GMNNO75496 209 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 IGHV1-46P01743 117 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 ADH4P08319 380 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 COX5BP10606 129 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 ITGA2P17301 1181 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 HNF1AP20823 631 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 GCH1P30793 250 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 ZNF81P51508 661 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 DVL1P1P54792 670 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-223ENST00000523125 GNGT1P63211 74 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 TSTQ16762 297 aaKnown RBP10.52□□□□□ -0.73
VEGFA-223ENST00000523125 SPRNQ5BIV9 151 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 SAMD4BQ5PRF9 694 aaKnown RBP10.52□□□□□ -0.73
VEGFA-223ENST00000523125 SMARCD3Q6STE5 483 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 UNQ6126/PRO20091Q6UXV3 157 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 DPY19L2P2Q6ZN68 376 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 USP51Q70EK9 711 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 VASH1Q7L8A9 365 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-223ENST00000523125 ZER1Q7Z7L7 766 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 GLB1L2Q8IW92 636 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 TMEM158Q8WZ71 300 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 LRRC37BQ96QE4 947 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 NUAK2Q9H093 628 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 POFUT1Q9H488 388 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 TAGLN3Q9UI15 199 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 AURKCQ9UQB9 309 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 ARL2BPQ9Y2Y0 163 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 WNK2Q9Y3S1 2297 aa10.52□□□□□ -0.73
VEGFA-223ENST00000523125 DCTN6O00399 190 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 ARPC2O15144 300 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 SGCEO43556 437 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 KHDRBS3O75525 346 aaKnown RBP10.51□□□□□ -0.73
VEGFA-223ENST00000523125 GADD45GO95257 159 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 TFP02787 698 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 MT-ND5P03915 603 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 GAAP10253 952 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 LSM6P62312 80 aaKnown RBP10.51□□□□□ -0.73
VEGFA-223ENST00000523125 SRSF2Q01130 221 aaKnown RBP10.51□□□□□ -0.73
VEGFA-223ENST00000523125 MVKQ03426 396 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 SCRN3Q0VDG4 424 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 DBPQ10586 325 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-223ENST00000523125 PSG7Q13046 419 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 KRT72Q14CN4 511 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 KCNMB1Q16558 191 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 FAM209AQ5JX71 171 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 AVPI1Q5T686 147 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 ADCK1Q86TW2 530 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 SLC7A6Q92536 515 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 NSMCE2Q96MF7 247 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 TSSK2Q96PF2 358 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 NDEL1Q9GZM8 345 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 RERGLQ9H628 205 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 ELOVL3Q9HB03 270 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 IL1RAPQ9NPH3 570 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 DECR2Q9NUI1 292 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 TBCCD1Q9NVR7 557 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 NDRG4Q9ULP0 352 aaKnown RBP10.51□□□□□ -0.73
VEGFA-223ENST00000523125 FBN3Q75N90 2809 aa10.51□□□□□ -0.73
VEGFA-223ENST00000523125 PLSCR5A0PG75 271 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 OR6C6A6NF89 314 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 SPRY3O43610 288 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 DOK2O60496 412 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 DEAF1O75398 565 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-223ENST00000523125 UBOX5O94941 541 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 PPP1R3DO95685 299 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 ABHD16AO95870 558 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 GPANK1O95872 356 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 HTR5AP47898 357 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 GSSP48637 474 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 ARHGDIAP52565 204 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 SMIM11AP58511 58 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 HIST1H3AP68431 136 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 SPIBQ01892 262 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 TEKQ02763 1124 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 HNRNPA0Q13151 305 aaKnown RBP10.5□□□□□ -0.73
VEGFA-223ENST00000523125 CDK5R2Q13319 367 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 AQP6Q13520 282 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 RFX4Q33E94 735 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 CCDC92Q53HC0 331 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-223ENST00000523125 HIST2H3PS2Q5TEC6 136 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 HIST2H3AQ71DI3 136 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 DEFB107AQ8IZN7 70 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 ERMAPQ96PL5 475 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-223ENST00000523125 OR52D1Q9H346 318 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 SAP30LQ9HAJ7 183 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 MSL2Q9HCI7 577 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 KRCC1Q9NPI7 259 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-223ENST00000523125 PLEK2Q9NYT0 353 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 ASH2LQ9UBL3 628 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 STARD10Q9Y365 291 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 WIPI2Q9Y4P8 454 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 LHFPL6Q9Y693 200 aa10.5□□□□□ -0.73
VEGFA-223ENST00000523125 IGLV1-36A0A0B4J1U3 117 aa10.49□□□□□ -0.73
VEGFA-223ENST00000523125 ARPC3O15145 178 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms