RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 MRPL53Q96EL3 112 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 L3HYPDHQ96EM0 354 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 SGTBQ96EQ0 304 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 VPS39Q96JC1 886 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 SENP8Q96LD8 212 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 LINC00052Q96N35 136 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 SERPINB11Q96P15 392 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 TRPM7Q96QT4 1865 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 C12orf57Q99622 126 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 OMDQ99983 421 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 P2RY13Q9BPV8 354 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 TBCDQ9BTW9 1192 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF416Q9BWM5 594 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MIXL1Q9H2W2 232 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 POPDC3Q9HBV1 291 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 EML4Q9HC35 981 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 AMBNQ9NP70 447 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 PRMT8Q9NR22 394 aaPredicted RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ABCC13Q9NSE7 274 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 FAM49BQ9NUQ9 324 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 GPR83Q9NYM4 423 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 PTTG3PQ9NZH4 202 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ADA2Q9NZK5 511 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 AKAP7Q9P0M2 348 aaPredicted RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 CTSFQ9UBX1 484 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 SEC14L4Q9UDX3 406 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 WARS2Q9UGM6 360 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ZNF346Q9UL40 294 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 RAB23Q9ULC3 237 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 NEU3Q9UQ49 428 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 RNF6Q9Y252 685 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MTF2Q9Y483 593 aaPredicted RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 MTCL1Q9Y4B5 1905 aaKnown RBP2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ASB4Q9Y574 426 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 NPTNQ9Y639 398 aa2.55□□□□□ -2
HMGB1P41-201ENST00000520234 ZSWIM8A7E2V4 1837 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 COL11A1P12107 1806 aaPredicted RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 IGLV3-10A0A075B6K4 115 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 TRBV2A0A0J9YWF9 115 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 RNF103-CHMP3A0A140T963 221 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 A0A1B0GTQ1 180 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 PNMA8CA0A1B0GUJ8 204 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 LOC100130705A0A1B0GUX0 176 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 A0A1W2PRG6 482 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 MYBPHLA2RUH7 354 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 OR6C70A6NIJ9 312 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 EFCAB7A8K855 629 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 I3L521 148 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 KCNK1O00180 336 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 UBFD1O14562 309 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 PHF1O43189 567 aaPredicted RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 NME2P1O60361 137 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 GMDSO60547 372 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 DPM1O60762 260 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 EEDO75530 441 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SRP72O76094 671 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 KBTBD11O94819 623 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 TRIM16O95361 564 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 TGM6O95932 706 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 PGK1P00558 417 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 CFDP00746 253 aaPredicted RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SEMG1P04279 462 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 CDK1P06493 297 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 PROS1P07225 676 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 ADRA2AP08913 450 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 NMBP08949 121 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SNRPCP09234 159 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 IFI30P13284 250 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 AREGP15514 252 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 STMN1P16949 149 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 HLA-DPA1P20036 260 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 MAGP20916 626 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 F8A1P23610 371 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 PTBP1P26599 531 aaKnown RBP eCLIP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 ADORA2BP29275 332 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 CCR1P32246 355 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 TNFRSF4P43489 277 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 GZMMP51124 257 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 RAB13P51153 203 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 OR4D2P58180 307 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 YBEYP58557 167 aaPredicted RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 TPI1P60174 286 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 RRAS2P62070 204 aaPredicted RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SNRPD2P62316 118 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 CRADDP78560 199 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 DCDP81605 110 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 HOXC5Q00444 222 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 EMX2Q04743 252 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 PUDPQ08623 228 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 ADIGQ0VDE8 80 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 BTN1A1Q13410 526 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 RCAN2Q14206 197 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 EXOSC7Q15024 291 aaKnown RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 ZMYND11Q15326 602 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 SGCAQ16586 387 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 IMPG1Q17R60 797 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 FAM83EQ2M2I3 478 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 C17orf58Q2M2W7 97 aa2.54□□□□□ -2
HMGB1P41-201ENST00000520234 LGALSLQ3ZCW2 172 aaPredicted RBP2.54□□□□□ -2
HMGB1P41-201ENST00000520234 AGKQ53H12 422 aa2.54□□□□□ -2
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms