RNA–Protein interactions for RNA: ENST00000519774.5

HPS4-218, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 471 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-218ENST00000519774 OR51V1Q9H2C8 321 aa10.25□□□□□ -0.77
HPS4-218ENST00000519774 MRPL22Q9NWU5 206 aaKnown RBP10.25□□□□□ -0.77
HPS4-218ENST00000519774 PLEK2Q9NYT0 353 aa10.25□□□□□ -0.77
HPS4-218ENST00000519774 TVP23BQ9NYZ1 205 aa10.25□□□□□ -0.77
HPS4-218ENST00000519774 ORC6Q9Y5N6 252 aa10.25□□□□□ -0.77
HPS4-218ENST00000519774 LHFPL6Q9Y693 200 aa10.25□□□□□ -0.77
HPS4-218ENST00000519774 PDZD2O15018 2839 aa10.25□□□□□ -0.77
HPS4-218ENST00000519774 NAV2Q8IVL1 2488 aa10.25□□□□□ -0.77
HPS4-218ENST00000519774 C5orf49A4QMS7 147 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 RER1O15258 196 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 DANCRP0C864 163 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 FAM157BP0CG42 384 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 ZNF35P13682 527 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 ZNF823P16415 610 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 STOMP27105 288 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 FMO3P31513 532 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 TTKP33981 857 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 HTR5AP47898 357 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 GDI2P50395 445 aaKnown RBP10.24□□□□□ -0.77
HPS4-218ENST00000519774 RPS7P62081 194 aaKnown RBP10.24□□□□□ -0.77
HPS4-218ENST00000519774 ADAM8P78325 824 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 RCN1Q15293 331 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 KLHL12Q53G59 568 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 AGAP6Q5VW22 663 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 SLX4IPQ5VYV7 408 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 ZNF544Q6NX49 715 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 TMEM154Q6P9G4 183 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 CORO6Q6QEF8 472 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 CXXC5Q7LFL8 322 aaKnown RBP10.24□□□□□ -0.77
HPS4-218ENST00000519774 SYT9Q86SS6 491 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 CPOQ8IVL8 374 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 MUC15Q8N387 334 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 ZNF511Q8NB15 262 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 NUP37Q8NFH4 326 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 PIGTQ969N2 578 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 WACQ9BTA9 647 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 CDADC1Q9BWV3 514 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 PRRG3Q9BZD7 231 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 HINT3Q9NQE9 182 aaKnown RBP10.24□□□□□ -0.77
HPS4-218ENST00000519774 CA10Q9NS85 328 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 SPEF1Q9Y4P9 236 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 COMMD3-BMI1R4GMX3 469 aa10.24□□□□□ -0.77
HPS4-218ENST00000519774 LOC100509620A0A075B734 347 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 ZAR1LA6NP61 321 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 GPRIN2O60269 458 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 SMPD2O60906 423 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 ALPLP05186 524 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 SPARCP09486 303 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 NR4A1P22736 598 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 APOBEC3AP31941 199 aaPredicted RBP10.23□□□□□ -0.77
HPS4-218ENST00000519774 THBS4P35443 961 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 POLR2IP36954 125 aaKnown RBP10.23□□□□□ -0.77
HPS4-218ENST00000519774 CDKN1AP38936 164 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 RPS27P42677 84 aaKnown RBP10.23□□□□□ -0.77
HPS4-218ENST00000519774 ALDH3A2P51648 485 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 ART1P52961 327 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 RAD23AP54725 363 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 NKX6-1P78426 367 aaPredicted RBP10.23□□□□□ -0.77
HPS4-218ENST00000519774 GUCA2AQ02747 115 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 RAB35Q15286 201 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 DEFB113Q30KQ7 82 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 ZIK1Q3SY52 487 aaPredicted RBP10.23□□□□□ -0.77
HPS4-218ENST00000519774 VASH1Q7L8A9 365 aaPredicted RBP10.23□□□□□ -0.77
HPS4-218ENST00000519774 DTX2Q86UW9 622 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 TCEANCQ8N8B7 351 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 BBS1Q8NFJ9 593 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 OR2AJ1Q8NGZ0 328 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 EME1Q96AY2 570 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 ZMYND19Q96E35 227 aaPredicted RBP10.23□□□□□ -0.77
HPS4-218ENST00000519774 POM121L2Q96KW2 1035 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 TRAF4Q9BUZ4 470 aaPredicted RBP10.23□□□□□ -0.77
HPS4-218ENST00000519774 GABARAPL3Q9BY60 117 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 GRIP2Q9C0E4 1043 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 CXorf56Q9H5V9 222 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 WDR76Q9H967 626 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 USE1Q9NZ43 259 aa10.23□□□□□ -0.77
HPS4-218ENST00000519774 NDRG4Q9ULP0 352 aaKnown RBP10.23□□□□□ -0.77
HPS4-218ENST00000519774 CCDC168Q8NDH2 2452 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 PRKYO43930 277 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 GLCEO94923 617 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 SNAP29O95721 258 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 CD8AP01732 235 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 LCKP06239 509 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 OR4A8P0C604 315 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 ANPEPP15144 967 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 ENTPD1P49961 510 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 ERVS71-1P61550 626 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 RPS23P62266 143 aaKnown RBP10.22□□□□□ -0.77
HPS4-218ENST00000519774 TRIP10Q15642 601 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 ADIPOQQ15848 244 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 CCDC92Q53HC0 331 aaPredicted RBP10.22□□□□□ -0.77
HPS4-218ENST00000519774 LINC01590Q5TEZ4 76 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 C12orf73Q69YU5 71 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 SLC18B1Q6NT16 456 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 CFAP77Q6ZQR2 320 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 ZBTB49Q6ZSB9 765 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 ERI1Q8IV48 349 aaKnown RBP10.22□□□□□ -0.77
HPS4-218ENST00000519774 GJC3Q8NFK1 279 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 OR6N2Q8NGY6 317 aa10.22□□□□□ -0.77
HPS4-218ENST00000519774 OR1F12Q8NHA8 337 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms