RNA–Protein interactions for RNA: ENST00000518689.5

VEGFA-218, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best) BASIC

Gene VEGFA, Length 630 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-218ENST00000518689 ZSCAN5BA6NJL1 495 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 B4DSR2 109 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 H3BSA7 217 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 SOCS2O14508 198 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 SLC16A7O60669 478 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 GMNNO75496 209 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 IGHV1-46P01743 117 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 ADH4P08319 380 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 COX5BP10606 129 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 ITGA2P17301 1181 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 HNF1AP20823 631 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 GCH1P30793 250 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 ZNF81P51508 661 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 DVL1P1P54792 670 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-218ENST00000518689 GNGT1P63211 74 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 TSTQ16762 297 aaKnown RBP10.52□□□□□ -0.73
VEGFA-218ENST00000518689 SPRNQ5BIV9 151 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 SAMD4BQ5PRF9 694 aaKnown RBP10.52□□□□□ -0.73
VEGFA-218ENST00000518689 SMARCD3Q6STE5 483 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 UNQ6126/PRO20091Q6UXV3 157 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 DPY19L2P2Q6ZN68 376 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 USP51Q70EK9 711 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 VASH1Q7L8A9 365 aaPredicted RBP10.52□□□□□ -0.73
VEGFA-218ENST00000518689 ZER1Q7Z7L7 766 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 GLB1L2Q8IW92 636 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 TMEM158Q8WZ71 300 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 LRRC37BQ96QE4 947 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 NUAK2Q9H093 628 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 POFUT1Q9H488 388 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 TAGLN3Q9UI15 199 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 AURKCQ9UQB9 309 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 ARL2BPQ9Y2Y0 163 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 WNK2Q9Y3S1 2297 aa10.52□□□□□ -0.73
VEGFA-218ENST00000518689 DCTN6O00399 190 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 ARPC2O15144 300 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 SGCEO43556 437 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 KHDRBS3O75525 346 aaKnown RBP10.51□□□□□ -0.73
VEGFA-218ENST00000518689 GADD45GO95257 159 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 TFP02787 698 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 MT-ND5P03915 603 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 GAAP10253 952 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 LSM6P62312 80 aaKnown RBP10.51□□□□□ -0.73
VEGFA-218ENST00000518689 SRSF2Q01130 221 aaKnown RBP10.51□□□□□ -0.73
VEGFA-218ENST00000518689 MVKQ03426 396 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 SCRN3Q0VDG4 424 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 DBPQ10586 325 aaPredicted RBP10.51□□□□□ -0.73
VEGFA-218ENST00000518689 PSG7Q13046 419 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 KRT72Q14CN4 511 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 KCNMB1Q16558 191 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 KRTAP24-1Q3LI83 254 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 FAM209AQ5JX71 171 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 AVPI1Q5T686 147 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 ADCK1Q86TW2 530 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 SLC7A6Q92536 515 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 NSMCE2Q96MF7 247 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 TSSK2Q96PF2 358 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 NDEL1Q9GZM8 345 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 RERGLQ9H628 205 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 ELOVL3Q9HB03 270 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 IL1RAPQ9NPH3 570 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 DECR2Q9NUI1 292 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 TBCCD1Q9NVR7 557 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 NDRG4Q9ULP0 352 aaKnown RBP10.51□□□□□ -0.73
VEGFA-218ENST00000518689 FBN3Q75N90 2809 aa10.51□□□□□ -0.73
VEGFA-218ENST00000518689 PLSCR5A0PG75 271 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 OR6C6A6NF89 314 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 SPRY3O43610 288 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 DOK2O60496 412 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 DEAF1O75398 565 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-218ENST00000518689 UBOX5O94941 541 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 PPP1R3DO95685 299 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 ABHD16AO95870 558 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 GPANK1O95872 356 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 HTR5AP47898 357 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 GSSP48637 474 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 ARHGDIAP52565 204 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 SMIM11AP58511 58 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 HIST1H3AP68431 136 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 SPIBQ01892 262 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 TEKQ02763 1124 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 HNRNPA0Q13151 305 aaKnown RBP10.5□□□□□ -0.73
VEGFA-218ENST00000518689 CDK5R2Q13319 367 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 AQP6Q13520 282 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 RFX4Q33E94 735 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 CCDC92Q53HC0 331 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-218ENST00000518689 HIST2H3PS2Q5TEC6 136 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 HIST2H3AQ71DI3 136 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 DEFB107AQ8IZN7 70 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 ERMAPQ96PL5 475 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-218ENST00000518689 OR52D1Q9H346 318 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 SAP30LQ9HAJ7 183 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 MSL2Q9HCI7 577 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 KRCC1Q9NPI7 259 aaPredicted RBP10.5□□□□□ -0.73
VEGFA-218ENST00000518689 PLEK2Q9NYT0 353 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 ASH2LQ9UBL3 628 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 STARD10Q9Y365 291 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 WIPI2Q9Y4P8 454 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 LHFPL6Q9Y693 200 aa10.5□□□□□ -0.73
VEGFA-218ENST00000518689 IGLV1-36A0A0B4J1U3 117 aa10.49□□□□□ -0.73
VEGFA-218ENST00000518689 ARPC3O15145 178 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms