RNA–Protein interactions for RNA: ENST00000517785.1

LINC00535-202, long intergenic non-protein coding RNA 535, humanhuman

TSL 3 BASIC

Gene LINC00535, Length 264 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00535-202ENST00000517785 MMADHCQ9H3L0 296 aaPredicted RBP4.61□□□□□ -1.67
LINC00535-202ENST00000517785 C1orf198Q9H425 327 aa4.61□□□□□ -1.67
LINC00535-202ENST00000517785 POLE3Q9NRF9 147 aa4.61□□□□□ -1.67
LINC00535-202ENST00000517785 ATAD3AQ9NVI7 634 aa4.61□□□□□ -1.67
LINC00535-202ENST00000517785 TMEM38BQ9NVV0 291 aa4.61□□□□□ -1.67
LINC00535-202ENST00000517785 NINJ2Q9NZG7 142 aa4.61□□□□□ -1.67
LINC00535-202ENST00000517785 CGGBP1Q9UFW8 167 aaPredicted RBP4.61□□□□□ -1.67
LINC00535-202ENST00000517785 IGKV1D-42A0A075B6H8 117 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 LOC100509620A0A075B734 347 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 A0A087WUJ7 227 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 A0A096LPI6 279 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 GOLGA6L6A8MZA4 724 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 TMEM114B3SHH9 223 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 H3BUX3 64 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 HMGN4O00479 90 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 PHYHO14832 338 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 AZIN1O14977 448 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 NPHS1O60500 1241 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 PEX11AO75192 247 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 GLRA3O75311 464 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 PTHP01270 115 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 DBIP07108 87 aaKnown RBP4.6□□□□□ -1.67
LINC00535-202ENST00000517785 FBP1P09467 338 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 PF4V1P10720 104 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 NEFHP12036 1026 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 RPS4Y1P22090 263 aaKnown RBP4.6□□□□□ -1.67
LINC00535-202ENST00000517785 LMO1P25800 156 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 CRHR1P34998 444 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 CHI3L1P36222 383 aaPredicted RBP4.6□□□□□ -1.67
LINC00535-202ENST00000517785 LIPAP38571 399 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 RPL3P39023 403 aaKnown RBP4.6□□□□□ -1.67
LINC00535-202ENST00000517785 GDI2P50395 445 aaKnown RBP4.6□□□□□ -1.67
LINC00535-202ENST00000517785 SLC35A2P78381 396 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 PSG7Q13046 419 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 GNA13Q14344 377 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 TAF11Q15544 211 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 ZNF404Q494X3 552 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 SLC36A2Q495M3 483 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 ZMAT1Q5H9K5 638 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 CFAP157Q5JU67 520 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 FAM69AQ5T7M9 428 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 IL23RQ5VWK5 629 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 ZNF841Q6ZN19 808 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 CALHM3Q86XJ0 350 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 ZNF440Q8IYI8 595 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 CLIP4Q8N3C7 705 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 ATG16L2Q8NAA4 619 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 WFDC9Q8NEX5 89 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 AGR3Q8TD06 166 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 MIPOL1Q8TD10 442 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 C10orf82Q8WW14 230 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 OIT3Q8WWZ8 545 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 RORBQ92753 470 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 COQ8BQ96D53 544 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 METTL2AQ96IZ6 378 aaKnown RBP4.6□□□□□ -1.67
LINC00535-202ENST00000517785 MEAF6Q9HAF1 191 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 SMURF1Q9HCE7 757 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 SIRT7Q9NRC8 400 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 GLTPQ9NZD2 209 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 SLC17A7Q9P2U7 560 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 EIF3KQ9UBQ5 218 aaKnown RBP4.6□□□□□ -1.67
LINC00535-202ENST00000517785 CTSZQ9UBR2 303 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 TMCC3Q9ULS5 477 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 TMED5Q9Y3A6 229 aa4.6□□□□□ -1.67
LINC00535-202ENST00000517785 EXOC1LA0A1B0GW35 172 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 CDHR4A6H8M9 788 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 G3V2L1 256 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 OR10H3O60404 316 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 AGR2O95994 175 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 PAHP00439 452 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 GUSBP08236 651 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 MMP7P09237 267 aaPredicted RBP4.59□□□□□ -1.67
LINC00535-202ENST00000517785 QDPRP09417 244 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 NR2F1P10589 423 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 MYL2P10916 166 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 ZNF32P17041 273 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 TCP1P17987 556 aaKnown RBP4.59□□□□□ -1.67
LINC00535-202ENST00000517785 ARRB2P32121 409 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 CDAP32320 146 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 PHBP35232 272 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 KIR2DS4P43632 304 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 SERPINB9P50453 376 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 ANXA11P50995 505 aaKnown RBP4.59□□□□□ -1.67
LINC00535-202ENST00000517785 ERVK-25P63136 954 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 PUDPQ08623 228 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 EGFEM1PQ0D2K5 195 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 TMEM95Q3KNT9 176 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 LIN52Q52LA3 116 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 CEP85LQ5SZL2 805 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 SFRP4Q6FHJ7 346 aaPredicted RBP4.59□□□□□ -1.67
LINC00535-202ENST00000517785 ETV3LQ6ZN32 361 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 PTOV1Q86YD1 416 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 PEX5LQ8IYB4 626 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 FGFRL1Q8N441 504 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 C10orf53Q8N6V4 93 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 BOLLQ8N9W6 283 aaKnown RBP4.59□□□□□ -1.67
LINC00535-202ENST00000517785 SPERTQ8NA61 448 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 SDR9C7Q8NEX9 313 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 Q8NFD4 153 aa4.59□□□□□ -1.67
LINC00535-202ENST00000517785 OR52P1PQ8NH57 321 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms