RNA–Protein interactions for RNA: ENST00000517514.1

CLN8-202, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 4

Gene CLN8, Length 568 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-202ENST00000517514 SYT9Q86SS6 491 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 CDC20BQ86Y33 519 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 WFDC8Q8IUA0 241 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 ERI1Q8IV48 349 aaKnown RBP8.59□□□□□ -1.03
CLN8-202ENST00000517514 CCDC36Q8IYA8 594 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 PAQR4Q8N4S7 273 aaPredicted RBP8.59□□□□□ -1.03
CLN8-202ENST00000517514 OR4F15Q8NGB8 312 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 LGALS12Q96DT0 336 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 DACH2Q96NX9 599 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 INTS14Q96SY0 518 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 SPOCK3Q9BQ16 436 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 USB1Q9BQ65 265 aaKnown RBP8.59□□□□□ -1.03
CLN8-202ENST00000517514 MED18Q9BUE0 208 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 OR2H1Q9GZK4 316 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 OBP2BQ9NPH6 170 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 ASH2LQ9UBL3 628 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 WARS2Q9UGM6 360 aaKnown RBP8.59□□□□□ -1.03
CLN8-202ENST00000517514 GDF2Q9UK05 429 aaPredicted RBP8.59□□□□□ -1.03
CLN8-202ENST00000517514 EXOGQ9Y2C4 368 aaKnown RBP8.59□□□□□ -1.03
CLN8-202ENST00000517514 PKDREJQ9NTG1 2253 aa8.59□□□□□ -1.03
CLN8-202ENST00000517514 LOC100509620A0A075B734 347 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 FAM221AA4D161 298 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 OR6C6A6NF89 314 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 SLC22A31A6NKX4 558 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 C12orf71A8MTZ7 269 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 SYNGR3O43761 229 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 XPNPEP2O43895 674 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 MPZL2O60487 215 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 UBL3O95164 117 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 FARS2O95363 451 aaKnown RBP8.58□□□□□ -1.04
CLN8-202ENST00000517514 HLA-DQA2P01906 255 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 CECR9P0C854 216 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 EPXP11678 715 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 ALOX5APP20292 161 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 APEX1P27695 318 aaKnown RBP8.58□□□□□ -1.04
CLN8-202ENST00000517514 CALCRP30988 508 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 KIR2DL3P43628 341 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 MTNR1AP48039 350 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 ZNF83P51522 516 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 IDH3GP51553 393 aaPredicted RBP8.58□□□□□ -1.04
CLN8-202ENST00000517514 BLVRAP53004 296 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 RPS7P62081 194 aaKnown RBP8.58□□□□□ -1.04
CLN8-202ENST00000517514 ADAM8P78325 824 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 MVKQ03426 396 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 SPOCK1Q08629 439 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 TMED1Q13445 227 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 AQP6Q13520 282 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 GSG1Q2KHT4 349 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 PABPC1L2AQ5JQF8 200 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 C6orf141Q5SZD1 244 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 ZNF774Q6NX45 483 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 VASH1Q7L8A9 365 aaPredicted RBP8.58□□□□□ -1.04
CLN8-202ENST00000517514 SLC16A9Q7RTY1 509 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 ZNF295-AS1Q8N0V1 137 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 PIP4P2Q8N4L2 257 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 FAM169BQ8N8A8 192 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 SETD9Q8NE22 299 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 OR51G2Q8NGK0 314 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 OR6N2Q8NGY6 317 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 OTOSQ8NHW6 89 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 FAM222BQ8WU58 562 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 SLC7A6Q92536 515 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 SGCDQ92629 289 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 RNFT2Q96EX2 444 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 LRRC46Q96FV0 321 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 HS3ST6Q96QI5 342 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 FKBP14Q9NWM8 211 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 PAK1IP1Q9NWT1 392 aaPredicted RBP8.58□□□□□ -1.04
CLN8-202ENST00000517514 CLN6Q9NWW5 311 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 H2AFY2Q9P0M6 372 aaPredicted RBP8.58□□□□□ -1.04
CLN8-202ENST00000517514 NDRG3Q9UGV2 375 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 MYRFQ9Y2G1 1151 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 LRRC42Q9Y546 428 aa8.58□□□□□ -1.04
CLN8-202ENST00000517514 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.57□□□□□ -1.04
CLN8-202ENST00000517514 MAGEB4O15481 346 aaPredicted RBP8.57□□□□□ -1.04
CLN8-202ENST00000517514 PLAUP00749 431 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 SERPINA5P05154 406 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 DBHP09172 617 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 SPARCP09486 303 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 CCL2P13500 99 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 ZNF35P13682 527 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 ZNF823P16415 610 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 ARR3P36575 388 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 CAPZA2P47755 286 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 UBE2NP61088 152 aaKnown RBP8.57□□□□□ -1.04
CLN8-202ENST00000517514 ZNF85Q03923 595 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 DOC2BQ14184 412 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 DAZAP2Q15038 168 aaPredicted RBP8.57□□□□□ -1.04
CLN8-202ENST00000517514 C3orf36Q3SXR2 165 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 SLC36A2Q495M3 483 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 NCMAPQ5T1S8 102 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 ZNF684Q5T5D7 378 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 C1QTNF12Q5T7M4 302 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 LCN1P1Q5VSP4 162 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 ALKBH2Q6NS38 261 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 DCXRQ7Z4W1 244 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 DPPA2Q7Z7J5 298 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 OR10H5Q8NGA6 315 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 OR52I1Q8NGK6 324 aa8.57□□□□□ -1.04
CLN8-202ENST00000517514 RNF133Q8WVZ7 376 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms