RNA–Protein interactions for RNA: ENST00000517494.1

CSGALNACT1-204, Transcript of chondroitin sulfate N-acetylgalactosaminyltransferase 1, humanhuman

TSL 3

Gene CSGALNACT1, Length 766 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSGALNACT1-204ENST00000517494 SAMD8Q96LT4 415 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 OR2V2Q96R30 315 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ALG12Q9BV10 488 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SSBP3Q9BWW4 388 aaPredicted RBP12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 KAT8Q9H7Z6 458 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TMBIM4Q9HC24 238 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 EMC7Q9NPA0 242 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 MAN2C1Q9NTJ4 1040 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 NDRG4Q9ULP0 352 aaKnown RBP12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 POLR3KQ9Y2Y1 108 aaPredicted RBP12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TGP01266 2768 aa12.8□□□□□ -0.36
CSGALNACT1-204ENST00000517494 C12orf71A8MTZ7 269 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 A8MXK9 166 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 H7C1C5 153 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CLDN34H7C241 214 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SURF4O15260 269 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 DOK2O60496 412 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 OR5F1O95221 314 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 MSR1P21757 451 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CD80P33681 288 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 OR1E2P47887 323 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CRYBA2P53672 197 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 CTXN1P60606 82 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 RPL27P61353 136 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 LCN6P62502 163 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SRSF4Q08170 494 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ENDOGQ14249 297 aaKnown RBP12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 VMACQ2NL98 169 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TUSC1Q2TAM9 212 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 Q6ZR03 302 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 OR5AS1Q8N127 324 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 MUC20Q8N307 709 aaPredicted RBP12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ATG16L2Q8NAA4 619 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 NPEPL1Q8NDH3 523 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ZDHHC16Q969W1 377 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SIGLEC11Q96RL6 698 aa12.79□□□□□ -0.36
CSGALNACT1-204ENST00000517494 IGHV3-64DA0A0J9YX35 117 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 F5H0A9 414 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 HOXA3O43365 443 aaPredicted RBP12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 KNG1P01042 644 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 IFI30P13284 250 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 ERFP50548 548 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 MMP16P51512 607 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 GNB2P62879 340 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 PAX8Q06710 450 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 C17orf107Q6ZR85 190 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 DPP10Q8N608 796 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 OR10AD1Q8NGE0 317 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 DYDC1Q8WWB3 177 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 SLITRK2Q9H156 845 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 IL19Q9UHD0 177 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 BAG5Q9UL15 447 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 LRCH1Q9Y2L9 728 aa12.78□□□□□ -0.36
CSGALNACT1-204ENST00000517494 TRAV27A0A087WT01 109 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 NPIPB13A6NJU9 1138 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 NPIPB4C9JG80 1138 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 TMEM178BH3BS89 294 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 ICMTO60725 284 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 CYB5R3P00387 301 aaPredicted RBP12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 SCRN3Q0VDG4 424 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 OTPQ5XKR4 325 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 C16orf87Q6PH81 154 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 LRRN1Q6UXK5 716 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 BRD3OSQ6XYD6 125 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 OR51A7Q8NH64 312 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 ZNF420Q8TAQ5 688 aaPredicted RBP12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 FNDC8Q8TC99 324 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 LIPHQ8WWY8 451 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 BPIFA2Q96DR5 249 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 CCT8L2Q96SF2 557 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 POLE4Q9NR33 117 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 TBCCD1Q9NVR7 557 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 IL20RAQ9UHF4 553 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 HIF3AQ9Y2N7 669 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 STARD10Q9Y365 291 aa12.77□□□□□ -0.37
CSGALNACT1-204ENST00000517494 TANC2Q9HCD6 1990 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 IGHV2-70DA0A0C4DH43 119 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 A6NIZ1 184 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 SGCEO43556 437 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 IGF2P01344 180 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 SCG5P05408 212 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 CRYBA1P05813 215 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 WNT2P09544 360 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 TSPAN19P0C672 248 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 KITLGP21583 273 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 RAP1BP61224 184 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 RAP1AP62834 184 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 GUCY1A3Q02108 690 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 LRRC23Q53EV4 343 aaPredicted RBP12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 FAM205BPQ63HN1 556 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 CCDC80Q76M96 950 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 KLBQ86Z14 1044 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 KIR3DL3Q8N743 410 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 OR10S1Q8NGN2 331 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 SLC7A6Q92536 515 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 UPRTQ96BW1 309 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 TPD52L3Q96J77 140 aa12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 POLR2J2Q9GZM3 115 aaKnown RBP12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 POLR2J3Q9H1A7 115 aaKnown RBP12.76□□□□□ -0.37
CSGALNACT1-204ENST00000517494 RERGLQ9H628 205 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms