RNA–Protein interactions for RNA: ENST00000516913.1

SCARNA20.3-201, small Cajal body-specific RNA 20, humanhuman

BASIC

Gene SCARNA20, Length 131 nt, Biotype scaRNA, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA20.3-201ENST00000516913 OR6C6A6NF89 314 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 NPIPB13A6NJU9 1138 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 A8MXK9 166 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 CENPBD1B2RD01 187 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 C22orf46C9J442 243 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 NPIPB4C9JG80 1138 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 TMEM178BH3BS89 294 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 TNFRSF13BO14836 293 aaPredicted RBP6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 PTP4A3O75365 173 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 FARS2O95363 451 aaKnown RBP6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 CYB5R3P00387 301 aaPredicted RBP6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 PLATP00750 562 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 IGF2P01344 180 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 RNASE1P07998 156 aaKnown RBP6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 KITLGP21583 273 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 GDI2P50395 445 aaKnown RBP6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 MMP16P51512 607 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 CTXN1P60606 82 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 TNFAIP6P98066 277 aaPredicted RBP6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 CD47Q08722 323 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 NFYCQ13952 458 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 MEP1BQ16820 701 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 ALG10Q5BKT4 473 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 MTX3Q5HYI7 312 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 REP15Q6BDI9 236 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 OR2T2Q6IF00 324 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 TREML4Q6UXN2 200 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 OR5AS1Q8N127 324 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 FGFRL1Q8N441 504 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 BPIFB2Q8N4F0 458 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 OR10AD1Q8NGE0 317 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 OR1J2Q8NGS2 313 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 LRRC8CQ8TDW0 803 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 SNX33Q8WV41 574 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 RAB1CQ92928 201 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 HAVCR1Q96D42 359 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 RAB39BQ96DA2 213 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 TSSK2Q96PF2 358 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 OR2V2Q96R30 315 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 C1orf198Q9H425 327 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 SMURF2Q9HAU4 748 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 PLEK2Q9NYT0 353 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 VSX1Q9NZR4 365 aaPredicted RBP6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 SLC13A4Q9UKG4 626 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 NUP50Q9UKX7 468 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 TIMM10BQ9Y5J6 103 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 AUP1Q9Y679 476 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 COL7A1Q02388 2944 aa6.91□□□□□ -1.3
SCARNA20.3-201ENST00000516913 DYNC2H1Q8NCM8 4307 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 TENM3Q9P273 2699 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 A0A1B0GWJ7 208 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 RER1O15258 196 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 TPD52L2O43399 206 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 EDF1O60869 148 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 MT-ND5P03915 603 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 HIST1H2ABP04908 130 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 IFI30P13284 250 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 ANPEPP15144 967 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 DRD4P21917 467 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 LSP1P33241 339 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 KDELR2P33947 212 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 RBM34P42696 430 aaKnown RBP6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 GPR4P46093 362 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 LIMS1P48059 325 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 ZNF84P51523 738 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 TAS2R41P59536 307 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 BTG1P62324 171 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 HIST1H3AP68431 136 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 PLP2Q04941 152 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 PRKCDQ05655 676 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 BAMBIQ13145 260 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 SEC23BQ15437 767 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 DEFB112Q30KQ8 113 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 KRTAP27-1Q3LI81 207 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 MMEL1Q495T6 779 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 HIST2H3PS2Q5TEC6 136 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 BRD3OSQ6XYD6 125 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 HIST2H3AQ71DI3 136 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 HIST3H2AQ7L7L0 130 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 DPPA2Q7Z7J5 298 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 SNX32Q86XE0 403 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 OR2Z1Q8NG97 314 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 ZNRF4Q8WWF5 429 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 STON2Q8WXE9 905 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 HIST1H2ACQ93077 130 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 RASD2Q96D21 266 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 BPIFA2Q96DR5 249 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 ATP6V1G3Q96LB4 118 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 SAMD8Q96LT4 415 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 TMEM246Q9BRR3 403 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 ALG12Q9BV10 488 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 PRDM13Q9H4Q3 707 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 WDR76Q9H967 626 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 SAR1AQ9NR31 198 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 IL20RAQ9UHF4 553 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 CORO2BQ9UQ03 480 aa6.9□□□□□ -1.3
SCARNA20.3-201ENST00000516913 LOC100653049A0A140TA62 436 aa6.89□□□□□ -1.31
SCARNA20.3-201ENST00000516913 A0A1W2PPL8 197 aa6.89□□□□□ -1.31
SCARNA20.3-201ENST00000516913 F5H5P2 479 aa6.89□□□□□ -1.31
SCARNA20.3-201ENST00000516913 CLDN34H7C241 214 aa6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms