RNA–Protein interactions for RNA: ENST00000516665.1

RNU6-539P-201, Transcript of RNA, U6 small nuclear 539, pseudogene, humanhuman

BASIC

Gene RNU6-539P, Length 103 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-539P-201ENST00000516665 RAB3DO95716 219 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 PRM1P04553 51 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 FYNP06241 537 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 OR5AC1P0C628 307 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 GPX2P18283 190 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 CALB2P22676 271 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 CCND3P30281 292 aaPredicted RBP-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 HRH1P35367 487 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 HTR5AP47898 357 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 EVX1P49640 407 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 RPL26P61254 145 aaKnown RBP-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 MORF4L2Q15014 288 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 FAM91A1Q658Y4 838 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 HIST2H2AA3Q6FI13 130 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 TEX43Q6ZNM6 134 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 FP248Q71RG6 208 aaPredicted RBP-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 AMN1Q8IY45 258 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 ATP6V0D2Q8N8Y2 350 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 MSANTD4Q8NCY6 345 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 TMBIM1Q969X1 311 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 SLC39A13Q96H72 371 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 NPY6RQ99463 290 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 Q9BRP9 147 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 PRO2289Q9P1D8 64 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 AASSQ9UDR5 926 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 CYTH4Q9UIA0 394 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 RPL26L1Q9UNX3 145 aaKnown RBP-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 DENND4CQ5VZ89 1909 aa-2.58□□□□□ -2.82
RNU6-539P-201ENST00000516665 IGHV2-70DA0A0C4DH43 119 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 A0A0J9YX75 114 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 A0A1W2PRG6 482 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 ANKRD18BA2A2Z9 1011 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 TMEM89A2RUT3 159 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 GABRR3A8MPY1 467 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 LOC110117498-PIK3R3F6TDL0 507 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 PRMT5O14744 637 aaPredicted RBP-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 COCHO43405 550 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 NME6O75414 186 aaPredicted RBP-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 UGT2B17O75795 530 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 GAS8O95995 478 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 SERPINF2P08697 491 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 CPA3P15088 417 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 PAICSP22234 425 aaKnown RBP-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 AHCYP23526 432 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 EIF2DP41214 584 aaKnown RBP-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 SIGLEC14Q08ET2 396 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 RIPPLY1Q0D2K3 151 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 MICBQ29980 383 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 TMEM249Q2WGJ8 235 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 SLC25A35Q3KQZ1 300 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 C6orf52Q5T4I8 152 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 MLIPQ5VWP3 458 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 NKAIN2Q5VXU1 208 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 GPR139Q6DWJ6 353 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 LRRC8BQ6P9F7 803 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 LANCL3Q6ZV70 420 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 SIAH3Q8IW03 269 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 METTL13Q8N6R0 699 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 C15orf54Q8N8G6 183 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 WDR36Q8NI36 951 aaKnown RBP-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 PNPT1Q8TCS8 783 aaKnown RBP-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 TMEM45BQ96B21 275 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 GALNT14Q96FL9 552 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 ZC2HC1AQ96GY0 325 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 ELMO2Q96JJ3 720 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 SPATA13Q96N96 652 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 SLC17A5Q9NRA2 495 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 FAM49BQ9NUQ9 324 aa-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 AATFQ9NY61 560 aaKnown RBP eCLIP-2.59□□□□□ -2.82
RNU6-539P-201ENST00000516665 CAMTA1Q9Y6Y1 1673 aa-2.6□□□□□ -2.82
RNU6-539P-201ENST00000516665 ARID4BQ4LE39 1312 aaPredicted RBP-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 CHD9Q3L8U1 2897 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 PGPEP1LA6NFU8 196 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 FAM74A7A6NL05 159 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 HIP1O00291 1037 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 FAM58BPP0C7Q3 252 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 ERGP11308 486 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 PCMT1P22061 227 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 HOXA6P31267 233 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 FGF9P31371 208 aaPredicted RBP-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 ZNF137PP52743 207 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 NKX2-5P52952 324 aaPredicted RBP-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 HSPA2P54652 639 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 SCRN3Q0VDG4 424 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 TCP10Q12799 353 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 DGCR6Q14129 220 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 FAM74A3Q4VXF1 159 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 SPIN4Q56A73 249 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 CCDC158Q5M9N0 1113 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 C12orf60Q5U649 245 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 C9orf135Q5VTT2 229 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 TMEM179Q6ZVK1 233 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 C16orf62Q7Z3J2 963 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 NUP93Q8N1F7 819 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 HSD17B11Q8NBQ5 300 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 DENND6BQ8NEG7 585 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 MFSD8Q8NHS3 518 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 FAM3DQ96BQ1 224 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 NUDT9Q9BW91 350 aa-2.6□□□□□ -2.83
RNU6-539P-201ENST00000516665 DPH5Q9H2P9 285 aa-2.6□□□□□ -2.83
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms