RNA–Protein interactions for RNA: ENST00000515710.1

TRIO-223, Transcript of trio Rho guanine nucleotide exchange factor, humanhuman

TSL 3

Gene TRIO, Length 1,913 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIO-223ENST00000515710 EXO5Q9H790 373 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 EMC7Q9NPA0 242 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 B3GAT2Q9NPZ5 323 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 CMAHPQ9Y471 501 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 R4GMQ9 66 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 MED12Q93074 2177 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 TRBV5-5A0A0J9YX44 114 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 A0A1B0GTH9 108 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 CPN1P15169 458 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 CD40LGP29965 261 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 KIR3DL2P43630 455 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 PPP5CP53041 499 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 CAV3P56539 151 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 Q499Y3 187 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 HSD17B12Q53GQ0 312 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 RNFT1Q5M7Z0 435 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 C16orf87Q6PH81 154 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 ZADH2Q8N4Q0 377 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 SNIP1Q8TAD8 396 aaKnown RBP17.8■□□□□ 0.44
TRIO-223ENST00000515710 RGP1Q92546 391 aaPredicted RBP17.8■□□□□ 0.44
TRIO-223ENST00000515710 THRSPQ92748 146 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 ZNF775Q96BV0 537 aaPredicted RBP17.8■□□□□ 0.44
TRIO-223ENST00000515710 SCNM1Q9BWG6 230 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 CENPMQ9NSP4 180 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 GDF2Q9UK05 429 aaPredicted RBP17.8■□□□□ 0.44
TRIO-223ENST00000515710 LHFPL6Q9Y693 200 aa17.8■□□□□ 0.44
TRIO-223ENST00000515710 SMIM30A4D0T7 59 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 RGS5O15539 181 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 SRSF10O75494 262 aaKnown RBP17.79■□□□□ 0.44
TRIO-223ENST00000515710 WNT11O96014 354 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 MSR1P21757 451 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 SGCAQ16586 387 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 TMEM53Q6P2H8 277 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 MZT2AQ6P582 158 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 CHMP1BQ7LBR1 199 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 CCDC190Q86UF4 302 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 CATSPERDQ86XM0 798 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 CENPSQ8N2Z9 138 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 GPR148Q8TDV2 347 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 ACOT12Q8WYK0 555 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 RBM24Q9BX46 236 aaKnown RBP17.79■□□□□ 0.44
TRIO-223ENST00000515710 RNF122Q9H9V4 155 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 LIPGQ9Y5X9 500 aa17.79■□□□□ 0.44
TRIO-223ENST00000515710 CNOT1A5YKK6 2376 aaKnown RBP17.79■□□□□ 0.44
TRIO-223ENST00000515710 NCR1O76036 304 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 PNPP00491 289 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 RAB3BP20337 219 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 TNFSF8P32971 234 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 SPANXN2Q5MJ10 180 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 IGFL3Q6UXB1 125 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 GPR137CQ8N3F9 429 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 ABHD3Q8WU67 409 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 DERL3Q96Q80 235 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 ATF6BQ99941 703 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 NIPAL2Q9H841 368 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 NOX4Q9NPH5 578 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 FAM186AA6NE01 2351 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 TFECO14948 347 aaPredicted RBP17.78■□□□□ 0.44
TRIO-223ENST00000515710 SPINK2P20155 84 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 NTF4P34130 210 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 RIPPLY2Q5TAB7 128 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 DDI2Q5TDH0 399 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 KLHL24Q6TFL4 600 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 CPT1CQ8TCG5 803 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 KCTD12Q96CX2 325 aaKnown RBP17.78■□□□□ 0.44
TRIO-223ENST00000515710 PRRG4Q9BZD6 226 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 EMC3Q9P0I2 261 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 SSUH2Q9Y2M2 353 aa17.78■□□□□ 0.44
TRIO-223ENST00000515710 GVINP1Q7Z2Y8 2422 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 A0A1W2PPK0 400 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 ZNF878C9JN71 531 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 IGHG3P01860 377 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 RAF1P04049 648 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 SRMP19623 302 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 MRPS34P82930 218 aaKnown RBP17.77■□□□□ 0.44
TRIO-223ENST00000515710 MINDY2Q8NBR6 621 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 IL17RDQ8NFM7 739 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 C17orf50Q8WW18 174 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 NABP1Q96AH0 204 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 WDYHV1Q96HA8 205 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 SLC30A2Q9BRI3 323 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 PARPBPQ9NWS1 579 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 ASH2LQ9UBL3 628 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 WASF3Q9UPY6 502 aa17.77■□□□□ 0.44
TRIO-223ENST00000515710 NOSIPQ9Y314 301 aaKnown RBP17.77■□□□□ 0.44
TRIO-223ENST00000515710 PCDHGA9Q9Y5G4 932 aaKnown RBP17.77■□□□□ 0.44
TRIO-223ENST00000515710 LOC110117498-PIK3R3F6TDL0 507 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 PDCD5O14737 125 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 PIN1P1O15428 100 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 NPR2P20594 1047 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 MMP16P51512 607 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 PPP3R1P63098 170 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 RNPS1Q15287 305 aaKnown RBP17.76■□□□□ 0.43
TRIO-223ENST00000515710 PARP16Q8N5Y8 322 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 OR10S1Q8NGN2 331 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 ZCCHC4Q9H5U6 513 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 ABCB9Q9NP78 766 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 OR52A1Q9UKL2 312 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 FBXL3Q9UKT7 428 aa17.76■□□□□ 0.43
TRIO-223ENST00000515710 GTF2A1LQ9UNN4 478 aa17.76■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms