RNA–Protein interactions for RNA: ENST00000512711.1

PDGFC-208, Transcript of platelet derived growth factor C, humanhuman

TSL 3

Gene PDGFC, Length 522 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFC-208ENST00000512711 EPS15P42566 896 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 UBE2NP61088 152 aaKnown RBP0.58□□□□□ -2.32
PDGFC-208ENST00000512711 CDK5Q00535 292 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 ZNF77Q15935 545 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 AVPI1Q5T686 147 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 MORN3Q6PF18 240 aaPredicted RBP0.58□□□□□ -2.32
PDGFC-208ENST00000512711 CNSTQ6PJW8 725 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 TBPL2Q6SJ96 375 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 SNX20Q7Z614 316 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 EGFL6Q8IUX8 553 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 SGPP2Q8IWX5 399 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 OR2T3Q8NH03 318 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 EMG1Q92979 244 aaKnown RBP0.58□□□□□ -2.32
PDGFC-208ENST00000512711 C10orf35Q96D05 121 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 LINC00574Q9H8X3 128 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 TAS2R3Q9NYW6 316 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 MUC16Q8WXI7 14507 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 ADGRA3Q8IWK6 1321 aa0.58□□□□□ -2.32
PDGFC-208ENST00000512711 IGHV3-72A0A0B4J1Y9 119 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 OVOL1O14753 267 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 CHST10O43529 356 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 IGLV2-8P01709 118 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 FGGP02679 453 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 UGT2B4P06133 528 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 C2P06681 752 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 ASGR1P07306 291 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 CRYGBP07316 175 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 CTSLP07711 333 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 GRIA1P42261 906 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 YAP1P46937 504 aaKnown RBP0.57□□□□□ -2.32
PDGFC-208ENST00000512711 PRLHRP49683 370 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 CDKN2DP55273 166 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 ACTG2P63267 376 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 HTD2P86397 168 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 ECH1Q13011 328 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 MRPL28Q13084 256 aaKnown RBP0.57□□□□□ -2.32
PDGFC-208ENST00000512711 THEM4Q5T1C6 240 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 PLEKHA8Q96JA3 519 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 C12orf42Q96LP6 360 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 SERPINB12Q96P63 405 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 PSKH2Q96QS6 385 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 PKMYT1Q99640 499 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 HSD17B10Q99714 261 aaKnown RBP0.57□□□□□ -2.32
PDGFC-208ENST00000512711 ZNF649Q9BS31 505 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 TRIM62Q9BVG3 475 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 TPPP3Q9BW30 176 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 AZI2Q9H6S1 392 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 EDA2RQ9HAV5 297 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 NMRAL1Q9HBL8 299 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 FARSBQ9NSD9 589 aaKnown RBP0.57□□□□□ -2.32
PDGFC-208ENST00000512711 NPTNQ9Y639 398 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 R4GN34 69 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 CNTNAP1P78357 1384 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 AHNAK2Q8IVF2 5795 aa0.57□□□□□ -2.32
PDGFC-208ENST00000512711 ICE1Q9Y2F5 2266 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 IGKV1-8A0A0C4DH67 115 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 IGHV7-4-1A0A0J9YVY3 117 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 ZNF816-ZNF321PA0A0X1KG74 233 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 A0A1W2PPV9 198 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 KRBOX1C9JBD0 128 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 E7EQL1 145 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 MANBAO00462 879 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 MFNGO00587 321 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 INAFM2P0DMQ5 153 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 ZNF250P15622 560 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 NTF3P20783 257 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 CCT3P49368 545 aaKnown RBP0.56□□□□□ -2.32
PDGFC-208ENST00000512711 CMC4P56277 68 aaPredicted RBP0.56□□□□□ -2.32
PDGFC-208ENST00000512711 GPX6P59796 221 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 TWF1Q12792 350 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 PYDC2Q56P42 97 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 TEX30Q5JUR7 227 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 SLC25A48Q6ZT89 311 aaKnown RBP0.56□□□□□ -2.32
PDGFC-208ENST00000512711 STK40Q8N2I9 435 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 FBXL13Q8NEE6 735 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 OR5T1Q8NG75 326 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 OR2L3Q8NG85 312 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 OR10AD1Q8NGE0 317 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 CCDC110Q8TBZ0 833 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 N4BP2L2Q92802 583 aaPredicted RBP0.56□□□□□ -2.32
PDGFC-208ENST00000512711 NTAN1Q96AB6 310 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 SEH1LQ96EE3 360 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 COPS8Q99627 209 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 RSG1Q9BU20 258 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 RAB33BQ9H082 229 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 ADAM28Q9UKQ2 775 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 N6AMT1Q9Y5N5 214 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 KIF16BQ96L93 1317 aa0.56□□□□□ -2.32
PDGFC-208ENST00000512711 TRAV6A0A075B6T7 132 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 TRAV26-1A0A087WT03 109 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 TRAV19A0A0A6YYK7 116 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 OR6C70A6NIJ9 312 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 OR5H1A6NKK0 313 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP0.55□□□□□ -2.32
PDGFC-208ENST00000512711 GOSR2O14653 212 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 CLDN9O95484 217 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 PSMB5P28074 263 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 FUSP35637 526 aaKnown RBP eCLIP0.55□□□□□ -2.32
PDGFC-208ENST00000512711 MAGEA8P43361 318 aa0.55□□□□□ -2.32
PDGFC-208ENST00000512711 IDH2P48735 452 aaKnown RBP0.55□□□□□ -2.32
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms