RNA–Protein interactions for RNA: ENST00000512452.1

DEPDC1B-206, Transcript of DEP domain containing 1B, humanhuman

TSL 2

Gene DEPDC1B, Length 661 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-206ENST00000512452 FAM27D1Q5T7N8 215 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 ABHD17BQ5VST6 288 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 AGAP7PQ5VUJ5 663 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 B3GNTL1Q67FW5 361 aaPredicted RBP11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 CNIH2Q6PI25 160 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 SLC25A47Q6Q0C1 308 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 IGF2-ASQ6U949 168 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 BAIAP2L2Q6UXY1 529 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 MDGA2Q7Z553 956 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 KRT77Q7Z794 578 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 OR8H2Q8N162 312 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 BEST3Q8N1M1 668 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 OR10H5Q8NGA6 315 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 OR5M1Q8NGP8 315 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 OR13C5Q8NGS8 318 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 RGP1Q92546 391 aaPredicted RBP11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 OR14A2Q96R54 314 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 ABHD6Q9BV23 337 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 SF3B5Q9BWJ5 86 aaKnown RBP11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 TMEM185BQ9H7F4 350 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 PPP1R3EQ9H7J1 279 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 ZFP64Q9NPA5 681 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 NOX4Q9NPH5 578 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 MED29Q9NX70 200 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 STMN3Q9NZ72 180 aa11.67□□□□□ -0.54
DEPDC1B-206ENST00000512452 hCG_2014768A0A024R1R8 64 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 LRRC3CA6NJW4 275 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 ZNF726A6NNF4 738 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 HPGDSO60760 199 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 IL7P13232 177 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 CFPP27918 469 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 RBMS1P29558 406 aaKnown RBP11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 DNASE1L1P49184 302 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 BCAP31P51572 246 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 B3GALT5-AS1P59052 145 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 RAC3P60763 192 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 CLN3Q13286 438 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 ASAH1Q13510 395 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 ETFDHQ16134 617 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 CEP78Q5JTW2 689 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 ESPNLQ6ZVH7 1005 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 ZNF227Q86WZ6 799 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 SNX29P2Q8IUI4 249 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 ZNF676Q8N7Q3 588 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 ST7LQ8TDW4 575 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 ABTB1Q969K4 478 aaPredicted RBP11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 PNPLA2Q96AD5 504 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 JSRP1Q96MG2 331 aaPredicted RBP11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 AMELYQ99218 206 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 FAM173AQ9BQD7 235 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 R4GMQ9 66 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 SPENQ96T58 3664 aaKnown RBP11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 CELSR2Q9HCU4 2923 aa11.66□□□□□ -0.54
DEPDC1B-206ENST00000512452 FUOMA2VDF0 154 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 SMIM30A4D0T7 59 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 AIPO00170 330 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 PSMD9O00233 223 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 PIN1P1O15428 100 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 MAGEB3O15480 346 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 TPPPO94811 219 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 GPANK1O95872 356 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 PSKH1P11801 424 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 NR4A2P43354 598 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 KIR3DL2P43630 455 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 CD97P48960 835 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 SUCLG1P53597 346 aaKnown RBP11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 FMODQ06828 376 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 TBR1Q16650 682 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 PYDC2Q56P42 97 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 WDR38Q5JTN6 314 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 HACD4Q5VWC8 232 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 LRRN1Q6UXK5 716 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 CATSPERDQ86XM0 798 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 DTX1Q86Y01 620 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 TRMT10AQ8TBZ6 339 aaKnown RBP11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 RNF133Q8WVZ7 376 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 C11orf40Q8WZ69 217 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 HSD17B8Q92506 261 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 NKD1Q969G9 470 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 KCNJ15Q99712 375 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 UTP23Q9BRU9 249 aaKnown RBP11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 NIPAL2Q9H841 368 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 LRFN1Q9P244 771 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 B4GALT7Q9UBV7 327 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 SPATA2Q9UM82 520 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 LRP12Q9Y561 859 aa11.65□□□□□ -0.54
DEPDC1B-206ENST00000512452 PCSK5Q92824 1860 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 CDRT15L2A8MXV6 281 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 FAM25AB3EWG3 89 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 FAM25CB3EWG5 89 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 FAM25GB3EWG6 89 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 ZNF814B7Z6K7 855 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 SRSF10O75494 262 aaKnown RBP11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 ISG15P05161 165 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 CSF3P09919 207 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 RNF224P0DH78 156 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 CALCBP10092 127 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 ACHEP22303 614 aa11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 TCEA1P23193 301 aaKnown RBP11.64□□□□□ -0.55
DEPDC1B-206ENST00000512452 CD96P40200 585 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms