RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 TNFRSF1BP20333 461 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 HTR3AP46098 478 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 SELENOWP63302 87 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 PRR20EP86478 221 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 PRR20CP86479 221 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 PRR20DP86480 221 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 PRR20BP86481 221 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 PRR20AP86496 221 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 TAF11Q15544 211 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 LRRC23Q53EV4 343 aaPredicted RBP7.6□□□□□ -1.19
NUP54-211ENST00000512151 CYBRD1Q53TN4 286 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 MRPL2Q5T653 305 aaKnown RBP7.6□□□□□ -1.19
NUP54-211ENST00000512151 INTS11Q5TA45 600 aaKnown RBP7.6□□□□□ -1.19
NUP54-211ENST00000512151 LCN8Q6JVE9 175 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 DHRS4L2Q6PKH6 230 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 PATL1Q86TB9 770 aaKnown RBP7.6□□□□□ -1.19
NUP54-211ENST00000512151 RBM45Q8IUH3 476 aaKnown RBP7.6□□□□□ -1.19
NUP54-211ENST00000512151 ARMC8Q8IUR7 673 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 PEX5LQ8IYB4 626 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 TMEM123Q8N131 208 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 LYG1Q8N1E2 194 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 GPR137CQ8N3F9 429 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 SSMEM1Q8WWF3 244 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 NRG4Q8WWG1 115 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 GEMIN6Q8WXD5 167 aaKnown RBP7.6□□□□□ -1.19
NUP54-211ENST00000512151 FAM162AQ96A26 154 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 ASB9Q96DX5 294 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 FAM71F1Q96KD3 344 aaPredicted RBP7.6□□□□□ -1.19
NUP54-211ENST00000512151 OR2M2Q96R28 347 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 ZNF607Q96SK3 696 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 S100A14Q9HCY8 104 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 EXOSC3Q9NQT5 275 aaKnown RBP7.6□□□□□ -1.19
NUP54-211ENST00000512151 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.6□□□□□ -1.19
NUP54-211ENST00000512151 DCAF13Q9NV06 445 aaKnown RBP7.6□□□□□ -1.19
NUP54-211ENST00000512151 SLCO1C1Q9NYB5 712 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 ACTR3BQ9P1U1 418 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 B3GAT1Q9P2W7 334 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 GPR160Q9UJ42 338 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 MAGEL2Q9UJ55 1249 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 PCDHGB5Q9Y5G0 923 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 SNX13Q9Y5W8 968 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 PCLOQ9Y6V0 5065 aa7.6□□□□□ -1.19
NUP54-211ENST00000512151 CDHR4A6H8M9 788 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 M0R3G1 203 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 TNFRSF13BO14836 293 aaPredicted RBP7.59□□□□□ -1.19
NUP54-211ENST00000512151 SERPINB7O75635 380 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 GKN3PP0CG01 181 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 PRG2P13727 222 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 B4GALT1P15291 398 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 PRKAR1BP31321 381 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 ACAA2P42765 397 aaKnown RBP7.59□□□□□ -1.19
NUP54-211ENST00000512151 ERFP50548 548 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 ZNF81P51508 661 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 RAB1AP62820 205 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 HOXC5Q00444 222 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 TRAP1Q12931 704 aaKnown RBP7.59□□□□□ -1.19
NUP54-211ENST00000512151 HERPUD1Q15011 391 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 ZMYND11Q15326 602 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 NPTX1Q15818 432 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 LIN52Q52LA3 116 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 DEFB121Q5J5C9 76 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 RNF220Q5VTB9 566 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 ZNF774Q6NX45 483 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 LRRN1Q6UXK5 716 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 ZNF813Q6ZN06 617 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 TSEN54Q7Z6J9 526 aaKnown RBP7.59□□□□□ -1.19
NUP54-211ENST00000512151 VTCN1Q7Z7D3 282 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 LRRC28Q86X40 367 aaPredicted RBP7.59□□□□□ -1.19
NUP54-211ENST00000512151 DHFR2Q86XF0 187 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 KRT73Q86Y46 540 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 OIT3Q8WWZ8 545 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 DNAJC9Q8WXX5 260 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 NSMCE2Q96MF7 247 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 LYSTQ99698 3801 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 ARHGDIGQ99819 225 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 FN3KRPQ9HA64 309 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 IL20RAQ9UHF4 553 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 ZNF232Q9UNY5 417 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 FOXJ3Q9UPW0 622 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 RASD1Q9Y272 281 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 SLC35A3Q9Y2D2 325 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 SIGLEC9Q9Y336 463 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 IFT52Q9Y366 437 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 DNAH7Q8WXX0 4024 aa7.59□□□□□ -1.19
NUP54-211ENST00000512151 SLC22A23A1A5C7 686 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 C3orf84H3BNL1 204 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 M0R3H8 397 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 TSPAN9O75954 239 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 VAMP5O95183 116 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 RAB36O95755 333 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 ZNF682O95780 498 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 SEMG1P04279 462 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 LCKP06239 509 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 RPSAP08865 295 aaKnown RBP7.59□□□□□ -1.2
NUP54-211ENST00000512151 OR1E2P47887 323 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 MMP15P51511 669 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 SELENOVP59797 346 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 KRTAP10-11P60412 298 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 FGF12P61328 243 aa7.59□□□□□ -1.2
NUP54-211ENST00000512151 CD69Q07108 199 aa7.59□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms