RNA–Protein interactions for RNA: ENST00000511409.1

TRAPPC11-207, Transcript of trafficking protein particle complex 11, humanhuman

TSL 4

Gene TRAPPC11, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-207ENST00000511409 NECAP2Q9NVZ3 263 aa2.07□□□□□ -2.08
TRAPPC11-207ENST00000511409 GPATCH2LQ9NWQ4 482 aa2.07□□□□□ -2.08
TRAPPC11-207ENST00000511409 CCDC59Q9P031 241 aaKnown RBP2.07□□□□□ -2.08
TRAPPC11-207ENST00000511409 GCNT4Q9P109 453 aa2.07□□□□□ -2.08
TRAPPC11-207ENST00000511409 VANGL2Q9ULK5 521 aa2.07□□□□□ -2.08
TRAPPC11-207ENST00000511409 MYO10Q9HD67 2058 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 IGHV5-10-1A0A0J9YXX1 117 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 OR6C74A6NCV1 312 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 CDC40O60508 579 aaKnown RBP eCLIP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 HUS1O60921 280 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 FOXH1O75593 365 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 VAMP5O95183 116 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 ARG1P05089 322 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 EIF4EP06730 217 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 ADRA2AP08913 450 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 RHOXF2BP0C7M4 288 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 IGHV1-8P0DP01 117 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 PSMC3P17980 439 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 TCN2P20062 427 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 NPY1RP25929 384 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 OTX1P32242 354 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 UQCRFS1P47985 274 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 UBE2NP61088 152 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 SP4Q02446 784 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 LIPEQ05469 1076 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 CDH17Q12864 832 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 MERTKQ12866 999 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 EIF4EBP1Q13541 118 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 IDI1Q13907 227 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 RCAN2Q14206 197 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 CHRNA6Q15825 494 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 GPR107Q5VW38 600 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 FBXW9Q5XUX1 488 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 PRMT9Q6P2P2 845 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 TTC23LQ6PF05 361 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 CEMP1Q6PRD7 247 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 MRPL55Q7Z7F7 128 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 LUZP2Q86TE4 346 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 NOXO1Q8NFA2 376 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 CCDC148Q8NFR7 591 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 OR4C5Q8NGB2 326 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 UBALD1Q8TB05 177 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 FRZBQ92765 325 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 RBMXL1Q96E39 390 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 PRRC1Q96M27 445 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 ZNF681Q96N22 645 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 GSDMAQ96QA5 445 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 RPP21Q9H633 154 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 SYNDIG1Q9H7V2 258 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 ZNF430Q9H8G1 570 aaPredicted RBP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 VPS37BQ9H9H4 285 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 C12orf10Q9HB07 376 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 BEX1Q9HBH7 125 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 RETNQ9HD89 108 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 ZNF355PQ9NSJ1 428 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 DCAF16Q9NXF7 216 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 YTHDF2Q9Y5A9 579 aaKnown RBP2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 KCNE3Q9Y6H6 103 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 AKNAQ7Z591 1439 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 CAMTA1Q9Y6Y1 1673 aa2.06□□□□□ -2.08
TRAPPC11-207ENST00000511409 A0A1B0GW55 424 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 SMKR1H3BMG3 65 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 L7N2F9 121 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 RAD51BO15315 384 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 EIF4E2O60573 245 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 CLDN11O75508 207 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 CD3GP09693 182 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 OR56A5P0C7T3 313 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 DUX4L2P0CJ85 424 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 DUX4L3P0CJ86 424 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 DUX4L5P0CJ88 424 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 DUX4L6P0CJ89 424 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 DUX4L7P0CJ90 424 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 BCKDHBP21953 392 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 DTYMKP23919 212 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 HMOX2P30519 316 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 CRISP1P54107 249 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 PRRX1P54821 245 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 ESRRGP62508 458 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 CCNA1P78396 465 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 TRAM2Q15035 370 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 PON2Q15165 354 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 QPRTQ15274 297 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 IRF4Q15306 451 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 ZNF726P1Q15940 193 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 ORMDL2Q53FV1 153 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 SMUG1Q53HV7 270 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 LCE1CQ5T751 118 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 LCE1BQ5T7P3 118 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 KHDRBS2Q5VWX1 349 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 TWF2Q6IBS0 349 aaKnown RBP2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 C12orf54Q6X4T0 127 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 FBXW12Q6X9E4 464 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 Q6ZR03 302 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 CALHM1Q8IU99 346 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 H1FOOQ8IZA3 346 aaPredicted RBP2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 COQ8AQ8NI60 647 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 NUBPLQ8TB37 319 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 APH1BQ8WW43 257 aa2.05□□□□□ -2.08
TRAPPC11-207ENST00000511409 TMEM230Q96A57 120 aa2.05□□□□□ -2.08
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms