RNA–Protein interactions for RNA: ENST00000511040.5

DDX41-212, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 721 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-212ENST00000511040 SLC36A3Q495N2 470 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 CORO6Q6QEF8 472 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 CCDC121Q6ZUS5 278 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 SYT9Q86SS6 491 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 ALDH16A1Q8IZ83 802 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 ZNF101Q8IZC7 436 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 SLC37A3Q8NCC5 494 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 OR51L1Q8NGJ5 315 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 OR9Q1Q8NGQ5 310 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 OR1J1Q8NGS3 322 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 SLC7A6Q92536 515 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 SNX18Q96RF0 628 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 TPK1Q9H3S4 243 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 EIF3KQ9UBQ5 218 aaKnown RBP12.01□□□□□ -0.49
DDX41-212ENST00000511040 REV1Q9UBZ9 1251 aa12.01□□□□□ -0.49
DDX41-212ENST00000511040 IGHV4-30-2A0A087WSY4 118 aa12□□□□□ -0.49
DDX41-212ENST00000511040 ARRDC5A6NEK1 342 aa12□□□□□ -0.49
DDX41-212ENST00000511040 H3BN98 237 aa12□□□□□ -0.49
DDX41-212ENST00000511040 RER1O15258 196 aa12□□□□□ -0.49
DDX41-212ENST00000511040 SGCEO43556 437 aa12□□□□□ -0.49
DDX41-212ENST00000511040 CIB2O75838 187 aa12□□□□□ -0.49
DDX41-212ENST00000511040 F12P00748 615 aaPredicted RBP12□□□□□ -0.49
DDX41-212ENST00000511040 HLA-DQA2P01906 255 aa12□□□□□ -0.49
DDX41-212ENST00000511040 TFP02787 698 aa12□□□□□ -0.49
DDX41-212ENST00000511040 HOXB6P17509 224 aaKnown RBP12□□□□□ -0.49
DDX41-212ENST00000511040 PCSK6P29122 969 aa12□□□□□ -0.49
DDX41-212ENST00000511040 RAD52P43351 418 aa12□□□□□ -0.49
DDX41-212ENST00000511040 LSM6P62312 80 aaKnown RBP12□□□□□ -0.49
DDX41-212ENST00000511040 TEKQ02763 1124 aa12□□□□□ -0.49
DDX41-212ENST00000511040 GLO1Q04760 184 aa12□□□□□ -0.49
DDX41-212ENST00000511040 AQP6Q13520 282 aa12□□□□□ -0.49
DDX41-212ENST00000511040 GK3PQ14409 553 aa12□□□□□ -0.49
DDX41-212ENST00000511040 KCNMB1Q16558 191 aa12□□□□□ -0.49
DDX41-212ENST00000511040 CCDC92Q53HC0 331 aaPredicted RBP12□□□□□ -0.49
DDX41-212ENST00000511040 ZNF362Q5T0B9 420 aaPredicted RBP12□□□□□ -0.49
DDX41-212ENST00000511040 CLEC2AQ6UVW9 174 aa12□□□□□ -0.49
DDX41-212ENST00000511040 DNM1P46Q6ZS02 220 aa12□□□□□ -0.49
DDX41-212ENST00000511040 RFPL4BQ6ZWI9 263 aa12□□□□□ -0.49
DDX41-212ENST00000511040 VASH1Q7L8A9 365 aaPredicted RBP12□□□□□ -0.49
DDX41-212ENST00000511040 ZBTB46Q86UZ6 589 aa12□□□□□ -0.49
DDX41-212ENST00000511040 LINC00346Q8IVM7 164 aa12□□□□□ -0.49
DDX41-212ENST00000511040 LNX2Q8N448 690 aa12□□□□□ -0.49
DDX41-212ENST00000511040 PROKR2Q8NFJ6 384 aa12□□□□□ -0.49
DDX41-212ENST00000511040 SLC26A10Q8NG04 563 aa12□□□□□ -0.49
DDX41-212ENST00000511040 OR2T33Q8NG76 320 aa12□□□□□ -0.49
DDX41-212ENST00000511040 ABHD4Q8TB40 342 aa12□□□□□ -0.49
DDX41-212ENST00000511040 TEX47Q8TBZ9 253 aa12□□□□□ -0.49
DDX41-212ENST00000511040 ZNRF4Q8WWF5 429 aa12□□□□□ -0.49
DDX41-212ENST00000511040 DDOQ99489 341 aa12□□□□□ -0.49
DDX41-212ENST00000511040 RHNO1Q9BSD3 238 aa12□□□□□ -0.49
DDX41-212ENST00000511040 REG4Q9BYZ8 158 aa12□□□□□ -0.49
DDX41-212ENST00000511040 RACGAP1Q9H0H5 632 aa12□□□□□ -0.49
DDX41-212ENST00000511040 RAB1BQ9H0U4 201 aa12□□□□□ -0.49
DDX41-212ENST00000511040 MMADHCQ9H3L0 296 aaPredicted RBP12□□□□□ -0.49
DDX41-212ENST00000511040 NTN4Q9HB63 628 aa12□□□□□ -0.49
DDX41-212ENST00000511040 PLEK2Q9NYT0 353 aa12□□□□□ -0.49
DDX41-212ENST00000511040 FKBP7Q9Y680 259 aa12□□□□□ -0.49
DDX41-212ENST00000511040 LHFPL6Q9Y693 200 aa12□□□□□ -0.49
DDX41-212ENST00000511040 TVP23AA6NH52 213 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 M0R233 179 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 SYNGR3O43761 229 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 NGFP01138 241 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 GYPBP06028 91 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 NAT2P11245 290 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 GABPB1Q06547 395 aaPredicted RBP11.99□□□□□ -0.49
DDX41-212ENST00000511040 CRMP1Q14194 572 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 TMEM154Q6P9G4 183 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 LYPD4Q6UWN0 246 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 CD300LDQ6UXZ3 194 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 ASRGL1Q7L266 308 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 ATG16L2Q8NAA4 619 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 OR10H5Q8NGA6 315 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 OR1F12Q8NHA8 337 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 SYNPRQ8TBG9 265 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 GTF3AQ92664 365 aaKnown RBP11.99□□□□□ -0.49
DDX41-212ENST00000511040 UTP4Q969X6 686 aaKnown RBP11.99□□□□□ -0.49
DDX41-212ENST00000511040 C4orf45Q96LM5 186 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 BCL2L14Q9BZR8 327 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 ZNF556Q9HAH1 456 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 TAAR3PQ9P1P4 343 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 BAIAP2Q9UQB8 552 aa11.99□□□□□ -0.49
DDX41-212ENST00000511040 RIIAD1A6NNX1 92 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 DEAF1O75398 565 aaPredicted RBP11.98□□□□□ -0.49
DDX41-212ENST00000511040 LY6G6DO95868 133 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 ABHD16AO95870 558 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 DBHP09172 617 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 CLUP10909 449 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 MPV17P39210 176 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 EVX1P49640 407 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 KLF3P57682 345 aaPredicted RBP11.98□□□□□ -0.49
DDX41-212ENST00000511040 PPP1CBP62140 327 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 COX10Q12887 443 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 NKPD1Q17RQ9 610 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 SHQ1Q6PI26 577 aaKnown RBP11.98□□□□□ -0.49
DDX41-212ENST00000511040 CLEC9AQ6UXN8 241 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 CFAP77Q6ZQR2 320 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 AMIGO2Q86SJ2 522 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 BIVMQ86UB2 503 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 OR2T4Q8NH00 348 aa11.98□□□□□ -0.49
DDX41-212ENST00000511040 SLC25A40Q8TBP6 338 aa11.98□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms