RNA–Protein interactions for RNA: ENST00000509552.5

CCHCR1-228, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 1 (best)

Gene CCHCR1, Length 2,304 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-228ENST00000509552 C4orf46Q504U0 113 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 DEGS2Q6QHC5 323 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 COX15Q7KZN9 410 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 HDDC2Q7Z4H3 204 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 OR5M1Q8NGP8 315 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 THAP3Q8WTV1 239 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 CCDC107Q8WV48 283 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 PCNPQ8WW12 178 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 SEH1LQ96EE3 360 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 ARL5BQ96KC2 179 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 CMKLR1Q99788 373 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 ZNF768Q9H5H4 540 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 OPN4Q9UHM6 478 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 MRPS18BQ9Y676 258 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 UNC13CQ8NB66 2214 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 A0A0A6YYH2 397 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 A0A1W2PPL8 197 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 A6NJ64 397 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 F5H5P2 479 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 GOSR2O14653 212 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 RGS11O94810 467 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 HEXBP07686 556 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 CD37P11049 281 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 SEC61A1P61619 476 aaKnown RBP16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 POU3F1Q03052 451 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 SPOCK1Q08629 439 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 FAM209AQ5JX71 171 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 LINC00346Q8IVM7 164 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 MUC20Q8N307 709 aaPredicted RBP16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 SLC25A45Q8N413 288 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 TMEM229BQ8NBD8 167 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 PMEPA1Q969W9 287 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 C5orf34Q96MH7 638 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 KCNK17Q96T54 332 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 NUDT22Q9BRQ3 303 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 SLCO5A1Q9H2Y9 848 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 G6PC2Q9NQR9 355 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 TRIOO75962 3097 aa16.06■□□□□ 0.16
CCHCR1-228ENST00000509552 NPIPB13A6NJU9 1138 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 NPIPB4C9JG80 1138 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 RAB3DO95716 219 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 HRGP04196 525 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 H2BFMP0C1H6 154 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 UBCP0CG48 685 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 RRASP10301 218 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 ENPP1P22413 925 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 AFF3P51826 1226 aaKnown RBP16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 FOXL2P58012 376 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 HSF1Q00613 529 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 PCK2Q16822 640 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 RHBDD2Q6NTF9 364 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 TMEM205Q6UW68 189 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 RFPL4BQ6ZWI9 263 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 NKAIN3Q8N8D7 197 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 APCDD1LQ8NCL9 501 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 ST7LQ8TDW4 575 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 GAL3ST1Q99999 423 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 ALX4Q9H161 411 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 CHST11Q9NPF2 352 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 SLC22A11Q9NSA0 550 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 MED11Q9P086 117 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 VDAC3Q9Y277 283 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 FREM3P0C091 2139 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 VSTM2BA6NLU5 285 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 HMSDA8MTL9 139 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 ZNF208O43345 1280 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 SIX6O95475 246 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 CAPZA1P52907 286 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 SIGIRRQ6IA17 410 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 C11orf88Q6PI97 169 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 ANKRD37Q7Z713 158 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 CDH26Q8IXH8 852 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 OR51A2Q8NGJ7 313 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 FOXRED1Q96CU9 486 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 WDR89Q96FK6 387 aaPredicted RBP16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 NPAS1Q99742 590 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 FOXQ1Q9C009 403 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 CENPMQ9NSP4 180 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 KIF25Q9UIL4 384 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 ASXL3Q9C0F0 2248 aa16.05■□□□□ 0.16
CCHCR1-228ENST00000509552 TEX51A0A1B0GUA7 166 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 BCAT2O15382 392 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 DOK2O60496 412 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 ZNF35P13682 527 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 H2BFSP57053 126 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 GMFBP60983 142 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 MPPED2Q15777 294 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 RABEPKQ7Z6M1 372 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 TDHQ8IZJ6 230 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 ABCA7Q8IZY2 2146 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 OR10H5Q8NGA6 315 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 NUBPLQ8TB37 319 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 LRRC20Q8TCA0 184 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 SLC25A21Q9BQT8 299 aaPredicted RBP16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 MED29Q9NX70 200 aa16.04■□□□□ 0.16
CCHCR1-228ENST00000509552 OR6C65A6NJZ3 312 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 ARPC5O15511 151 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 CYB5AP00167 134 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 ITGB2P05107 769 aa16.03■□□□□ 0.16
CCHCR1-228ENST00000509552 MELTFP08582 738 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms