RNA–Protein interactions for RNA: ENST00000509409.5

TPM3-219, Transcript of tropomyosin 3, humanhuman

TSL 2

Gene TPM3, Length 1,248 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-219ENST00000509409 SCRN3Q0VDG4 424 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 FHL1Q13642 323 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 MTX3Q5HYI7 312 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 TMEM255AQ5JRV8 349 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 FOXL2NBQ6ZUU3 175 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 ST7LQ8TDW4 575 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 Q96M85 177 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 ZNF570Q96NI8 536 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 WACQ9BTA9 647 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 EFCAB1Q9HAE3 211 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 CGGBP1Q9UFW8 167 aaPredicted RBP13.05□□□□□ -0.32
TPM3-219ENST00000509409 KLHL21Q9UJP4 597 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 ADAM18Q9Y3Q7 739 aa13.05□□□□□ -0.32
TPM3-219ENST00000509409 FAM32AQ9Y421 112 aaKnown RBP13.05□□□□□ -0.32
TPM3-219ENST00000509409 J3QLI3 93 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 CDC42EP2O14613 210 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 SGCEO43556 437 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 DOK2O60496 412 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 CCDC22O60826 627 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 SBK2P0C263 348 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 LCN2P80188 198 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 PSG7Q13046 419 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 C1orf94Q6P1W5 598 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 C1orf229Q6ZS94 237 aaPredicted RBP13.04□□□□□ -0.32
TPM3-219ENST00000509409 TMPRSS11FQ6ZWK6 438 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 NANPQ8TBE9 248 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 ZFAND2BQ8WV99 257 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 CMBLQ96DG6 245 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 JMJD8Q96S16 334 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 KCTD14Q9BQ13 255 aaPredicted RBP13.04□□□□□ -0.32
TPM3-219ENST00000509409 TMPRSS13Q9BYE2 586 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 C7orf69Q9H7B7 122 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 NMNAT1Q9HAN9 279 aaPredicted RBP13.04□□□□□ -0.32
TPM3-219ENST00000509409 TBCCD1Q9NVR7 557 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 TMEM5Q9Y2B1 443 aa13.04□□□□□ -0.32
TPM3-219ENST00000509409 PRSS37A4D1T9 235 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 TRIM77I1YAP6 450 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 NME4O00746 187 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 NDUFAB1O14561 156 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 AHCYL1O43865 530 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 SLC16A7O60669 478 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 KHDRBS3O75525 346 aaKnown RBP13.03□□□□□ -0.32
TPM3-219ENST00000509409 ADH4P08319 380 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 COX5BP10606 129 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 NCK1P16333 377 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 ADRA2CP18825 462 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 CENPAP49450 140 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 GSK3BP49841 420 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 HSP90B2PQ58FF3 399 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 SPRNQ5BIV9 151 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 MESTQ5EB52 335 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 C1QL2Q7Z5L3 287 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 NPEPL1Q8NDH3 523 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 SEMA6DQ8NFY4 1073 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 OR2Z1Q8NG97 314 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 GCDHQ92947 438 aaPredicted RBP13.03□□□□□ -0.32
TPM3-219ENST00000509409 FAM46AQ96IP4 442 aaKnown RBP13.03□□□□□ -0.32
TPM3-219ENST00000509409 SUCNR1Q9BXA5 334 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 POFUT1Q9H488 388 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 PLEK2Q9NYT0 353 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 PURGQ9UJV8 347 aaKnown RBP13.03□□□□□ -0.32
TPM3-219ENST00000509409 RPS6KA6Q9UK32 745 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 STARD10Q9Y365 291 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 NPTNQ9Y639 398 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 ENPP4Q9Y6X5 453 aa13.03□□□□□ -0.32
TPM3-219ENST00000509409 TEX13CA0A0J9YWL9 993 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 ICMTO60725 284 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 GMNNO75496 209 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 PRSS23O95084 383 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 NDUFB2O95178 105 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 H1F0P07305 194 aaKnown RBP13.02□□□□□ -0.33
TPM3-219ENST00000509409 CD55P08174 381 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 TNFRSF1AP19438 455 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 TUBG1P23258 451 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 GATA3P23771 443 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 NUDT2P50583 147 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 CDK5R2Q13319 367 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 FGD3Q5JSP0 725 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 OTPQ5XKR4 325 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 USP43Q70EL4 1123 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 BPIFB2Q8N4F0 458 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 PTP4A1Q93096 173 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 RASD2Q96D21 266 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 SAMD8Q96LT4 415 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 ANKRD19PQ9H560 264 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 TUBG2Q9NRH3 451 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 TMEM106BQ9NUM4 274 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 EGFL7Q9UHF1 273 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 AURKCQ9UQB9 309 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 COA3Q9Y2R0 106 aaPredicted RBP13.02□□□□□ -0.33
TPM3-219ENST00000509409 IER3IP1Q9Y5U9 82 aa13.02□□□□□ -0.33
TPM3-219ENST00000509409 NBEAL1Q6ZS30 2694 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 SURF4O15260 269 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 PTP4A3O75365 173 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 FOXH1O75593 365 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 CTLA4P16410 223 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 ZNF26P17031 533 aaPredicted RBP13.01□□□□□ -0.33
TPM3-219ENST00000509409 FPR2P25090 351 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 CFPP27918 469 aa13.01□□□□□ -0.33
TPM3-219ENST00000509409 HILS1P60008 231 aa13.01□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms