RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 LRRC18Q8N456 261 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 CYB561A3Q8NBI2 242 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC37A3Q8NCC5 494 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC26A10Q8NG04 563 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 OR10S1Q8NGN2 331 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 OR4K13Q8NH42 304 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 GNPDA2Q8TDQ7 276 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 SMAP2Q8WU79 429 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 C11orf40Q8WZ69 217 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC7A6Q92536 515 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 HIST1H2ACQ93077 130 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 MCUR1Q96AQ8 359 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 MUCL1Q96DR8 90 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 DUS3LQ96G46 650 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 SORCS2Q96PQ0 1159 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 NMNAT3Q96T66 252 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 FEVQ99581 238 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 SMR3AQ99954 134 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 RBM4Q9BWF3 364 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 ZNF416Q9BWM5 594 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 NMNAT2Q9BZQ4 307 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 PNRC2Q9NPJ4 139 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 CA10Q9NS85 328 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 BEX4Q9NWD9 120 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 CISD1Q9NZ45 108 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 TMEFF2Q9UIK5 374 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 FZR1Q9UM11 496 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 POFUT2Q9Y2G5 429 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 COA3Q9Y2R0 106 aaPredicted RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 FAM32AQ9Y421 112 aaKnown RBP6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 LHFPL6Q9Y693 200 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 TLN2Q9Y4G6 2542 aa6.2□□□□□ -1.42
TOPBP1-207ENST00000509162 A0A1W2PPL8 197 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 ARRDC5A6NEK1 342 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 A6NIZ1 184 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 FAM171A2A8MVW0 826 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 PRR32B1ATL7 298 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 E9PQ18 207 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 SMPD2O60906 423 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 GMNNO75496 209 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 NCR1O76036 304 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 UBL3O95164 117 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 CST1P01037 141 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 DNASE1P24855 282 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 APEX1P27695 318 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC6A6P31641 620 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 PYCR1P32322 319 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 GGT2P36268 569 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 CAPZA2P47755 286 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 DAPP51397 102 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 RAP1BP61224 184 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 RAB1AP62820 205 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 RAP1AP62834 184 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 HIST1H3AP68431 136 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 KEAP1Q14145 624 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 KPNB1Q14974 876 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 MAD2L1BPQ15013 274 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 ATP6AP1Q15904 470 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 RSPO1Q2MKA7 263 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 SLC36A3Q495N2 470 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 NRN1LQ496H8 165 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 CCDC92Q53HC0 331 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 SPRNQ5BIV9 151 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 HIST2H3PS2Q5TEC6 136 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 ACSM5Q6NUN0 579 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 CDPF1Q6NVV7 123 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 ZNF774Q6NX45 483 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 LEG1Q6P5S2 330 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 CFAP77Q6ZQR2 320 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 HIST2H3AQ71DI3 136 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 ZBTB46Q86UZ6 589 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 ZCCHC24Q8N2G6 241 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 SVOPLQ8N434 492 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 LNX2Q8N448 690 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 NUP37Q8NFH4 326 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 OR9Q1Q8NGQ5 310 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 LRTOMTQ8WZ04 291 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 POM121L2Q96KW2 1035 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 ERMAPQ96PL5 475 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 DHRS9Q9BPW9 319 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 CACNG6Q9BXT2 260 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 MRPL37Q9BZE1 423 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 OR2H1Q9GZK4 316 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 GABARAPL1Q9H0R8 117 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 OR51B6Q9H340 312 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 DENND2DQ9H6A0 471 aaPredicted RBP6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 IFT22Q9H7X7 185 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 REEP1Q9H902 201 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 MED20Q9H944 212 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 B3GAT2Q9NPZ5 323 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 IL20Q9NYY1 176 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 SPEF1Q9Y4P9 236 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 ATP23Q9Y6H3 246 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 CHD3Q12873 2000 aaKnown RBP6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 MED13LQ71F56 2210 aa6.19□□□□□ -1.42
TOPBP1-207ENST00000509162 ANK2Q01484 3957 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 CCDC182A6NF36 153 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 OR6C6A6NF89 314 aa6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 TPD52L2O43399 206 aaKnown RBP6.18□□□□□ -1.42
TOPBP1-207ENST00000509162 SYNGR3O43761 229 aa6.18□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms