RNA–Protein interactions for RNA: ENST00000509043.1

HTT-205, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 380 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-205ENST00000509043 ANKRD10Q9NXR5 420 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 NUFIP1Q9UHK0 495 aaKnown RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 ING1Q9UK53 422 aaPredicted RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 BOKQ9UMX3 212 aaPredicted RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 RCE1Q9Y256 329 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 POLR1DQ9Y2S0 133 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 RBMX2Q9Y388 322 aaKnown RBP8.23□□□□□ -1.09
HTT-205ENST00000509043 EMC9Q9Y3B6 208 aa8.23□□□□□ -1.09
HTT-205ENST00000509043 TRAV8-7A0A075B6U6 113 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 LOC100289279A0A1B0GTE1 492 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 LOC107986453A0A1B0GWG9 222 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 A0A1W2PNR3 127 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 A0A1W2PPL8 197 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 LOC390937A0A1W2PQ73 354 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 C9orf172C9J069 976 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 NPIPA2E9PIF3 369 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 INMT-MINDY4F8WBC2 141 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 NPIPA3F8WFD2 350 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 SULT1C2O00338 296 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 TERTO14746 1132 aaKnown RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 TFECO14948 347 aaPredicted RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 XRCC3O43542 346 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 GALR2O43603 387 aaPredicted RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 KRT33AO76009 404 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 SCGNO76038 276 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 CSRP1P21291 193 aaKnown RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 CNR1P21554 472 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 CTSSP25774 331 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 CD82P27701 267 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 SFTPDP35247 375 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 FAUP35544 74 aaKnown RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 RPS27P42677 84 aaKnown RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 CSNK1A1P48729 337 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 GABREP78334 506 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 MFGE8Q08431 387 aaPredicted RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 CBX3Q13185 183 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 SNTB2Q13425 540 aaKnown RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 KLF9Q13886 244 aaPredicted RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 INPP5JQ15735 1006 aaPredicted RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 FAM189A2Q15884 450 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 TATDN3Q17R31 274 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 ELFN2Q5R3F8 820 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 PDSS1Q5T2R2 415 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 FAM166AQ6J272 317 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 LRFN4Q6PJG9 635 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 ESPNLQ6ZVH7 1005 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 CREB3L2Q70SY1 520 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 KRT74Q7RTS7 529 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 TIPARPQ7Z3E1 657 aaKnown RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 SYT9Q86SS6 491 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 TCTE3Q8IZS6 198 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 BEST3Q8N1M1 668 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 OR13C3Q8NGS6 347 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 SYNPRQ8TBG9 265 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 TMEM54Q969K7 222 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 PHF21AQ96BD5 680 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 ZFP3Q96NJ6 502 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 GNRHR2Q96P88 292 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 OR2B2Q9GZK3 357 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 FAM206AQ9NX38 181 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 GLTPQ9NZD2 209 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 NLKQ9UBE8 527 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 B4GALT7Q9UBV7 327 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 GDF2Q9UK05 429 aaPredicted RBP8.22□□□□□ -1.09
HTT-205ENST00000509043 GTF2A1LQ9UNN4 478 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 SLC22A13Q9Y226 551 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 SDK1Q7Z5N4 2213 aa8.22□□□□□ -1.09
HTT-205ENST00000509043 IGKV1D-43A0A0B4J1Z2 117 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 A0A1B0GTH9 108 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 PRAF2O60831 178 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 LRP3O75074 770 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 GLSO94925 669 aaPredicted RBP8.21□□□□□ -1.1
HTT-205ENST00000509043 MPZL1O95297 269 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 MAS1P04201 325 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 QDPRP09417 244 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 RAB6AP20340 208 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 MSR1P21757 451 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 HSD11B1P28845 292 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 GDNFP39905 211 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 PTH2RP49190 550 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 ZNF84P51523 738 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 CAMK2DQ13557 499 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 TAF13Q15543 124 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 STK11Q15831 433 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 TBRG1Q3YBR2 411 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 ZFP69Q49AA0 526 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 C1orf100Q5SVJ3 147 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 RAB12Q6IQ22 244 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.21□□□□□ -1.1
HTT-205ENST00000509043 GLRX5Q86SX6 157 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 SIAH3Q8IW03 269 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 SERPINA12Q8IW75 414 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 GJC3Q8NFK1 279 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 OR9K2Q8NGE7 335 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 OR51A4Q8NGJ6 313 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 OR5D14Q8NGL3 314 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 OR6N1Q8NGY5 312 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 OR56B4Q8NH76 319 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 FAM3DQ96BQ1 224 aa8.21□□□□□ -1.1
HTT-205ENST00000509043 UPRTQ96BW1 309 aa8.21□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms